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SCN18_25_8_15_R4_B_scaffold_195_12

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(15885..16421)

Top 3 Functional Annotations

Value Algorithm Source
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 177.0
  • Bit_score: 295
  • Evalue 4.80e-77
RNA pyrophosphohydrolase id=2976982 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 183.0
  • Bit_score: 283
  • Evalue 1.30e-73
dinucleoside polyphosphate hydrolase similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 164.0
  • Bit_score: 281
  • Evalue 1.40e-73

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGGTCGATCCGGACGGCTTCCGCCCCAACGTCGGCATCGTGCTGATGCAGGAAGACGGCCGCCTGTTCTGGGCGCGTCGGGTGCGTCGCGACGGCTGGCAGTTCCCGCAGGGCGGCATCCACACCGACGAGACCCCGCTGGAGGCGATGCACCGCGAGCTGCGCGAGGAAACCGGGCTGCTGCCGGAGCATGTCGAGGTACTGGGAGCCACGCCCGGCTGGCTGCGCTACCGGCTGCCGCCGCACGCGATCCGCCACCGCGACCGGCTGGTCTGCATCGGCCAGAAGCAGGTGTGGTTCCTGCTGCGCTTCCGCGGCCACGAGCGCGACCTGCGCCTGGACCTGACCACCACCCCGGAATTCGACGACTGGCGCTGGGTGGACTACTGGTACCCGCTGGCGCATGTGGTGCCGTTCAAGCGCAACGTCTATACCCGCGCCCTGCACTACCTGGCGCCACTGGCGCGCGCGGTGGCGGGCCCGCAGGCCATCCCCGAGCCGACCCCGGACGCCCCGCAGCGGCTGCGTCAGCGCTGA
PROTEIN sequence
Length: 179
VVDPDGFRPNVGIVLMQEDGRLFWARRVRRDGWQFPQGGIHTDETPLEAMHRELREETGLLPEHVEVLGATPGWLRYRLPPHAIRHRDRLVCIGQKQVWFLLRFRGHERDLRLDLTTTPEFDDWRWVDYWYPLAHVVPFKRNVYTRALHYLAPLARAVAGPQAIPEPTPDAPQRLRQR*