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SCN18_25_8_15_R4_B_scaffold_195_61

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(75126..76553)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F4548D similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 467.0
  • Bit_score: 513
  • Evalue 1.20e-142
Membrane protein {ECO:0000313|EMBL:KGM50898.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 465.0
  • Bit_score: 609
  • Evalue 3.00e-171
tolC; type I secretion outer membrane protein, TolC precursor similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 467.0
  • Bit_score: 513
  • Evalue 3.50e-143

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGCCGCGTCGCTCGCTCGCCCTTGCCCTTGCTGCCATCCTGCTGCCCGCCGCAGCGCAGGCGGATGACCTGCTGCAGAGCTACCAGAACGCACGCAGCAACGACCCGCAGTATGCCGCCGCCGAATCCAGCCGCTTGATCGGCCGCGAGGGCGCGGTGCAGGCGCGCGCCGCGCTGCTGCCGCAGATCAACGGCAGTGGCAGCTACCAGCGCACCCGCAGCGACGGGCCCTCGACCCAGACCCAGTTCGACCCCAACAGCGGCCAGCCGATCCGCTTCAGTGGCAACAGCTCCACCACCACCAACAGCCGCCGCTACGGAATCGGTGTGGATCAGACCCTGCTGGATTTCGGCAAGCTCAGCCGTGTACGCAGCCAGAACGCCCTCAGTCAGGCTGCCGATTATCAGTACGATGCCGCCGGGCAGTCCTTGATCGTTCGCACGGCGCAGGCCTACTTCAATGTGCTGGTGGCGCTGGAAACCCTGAGCGCCTCCGAAGCGTCCGAAGCCGCGTTCAAGAAACAGTACGACTTCGCCAGCAAGCGCCTGGAAGTCGGACTGGCCCCGGTGACGGACGTGTACGAGGCGCAGGCGCAGTATGACGGCGCGCGCGCCAACACCATCCTGTCGCGCAATGCGGTGATGGATGCCTATCAGGCGCTGATGGAGATCACCGGGACTCCAGTGGCCAGCCTCAAGGCGCTGCCTGAGGACTTCAAGCCGAGCCTGCCGTCCAAGCAGGATGCCGATGCCTGGGTCGCGCAGGCCATCGCCAACAACGCCTCGCTCAAAGCCCTGGAAATGCAGTTGAAATCAGCCGAGGCCGACGTGGCCACCGCGCGCTCCGCGCATCTGCCCACGCTCACGCTGAGCGGGGGCTATAACAAAAACGCAAGCTGGGGCGACTCCACTTTCAGCAGCAGCAATCCGCCATTTTCCAGCACCTTCCCCATCAGCAACGAAAGCAAGGGGCCGTCGGTCGGCATTACCCTGACCGTGCCGATCTTCTCCGGGGGCGCGACCCAGTCGCGGGTTCGCCAAGCGCTGGCTCAACGCGACCTCGTCCAGGATCAGCTGGAACAACAGCGGCGTGCGCTCATGCGCAATACCCGCAATGCCTATCGGGGGCTGCTCGCCGGCATCAGCGAGATCGAAGCGCGCCGGCTCGCGCTGGTCTCGGCGCAGAGCGCCTACGATGCGTCCCAGGTCGGGCTGGAAGTCGGCACCCGCACCGTGCTGGACGTGCTGAACAACCAGCGCATCCTGTTTTCCGCGCAGCAGGCCTACGCCCAGGCCAAGTACAACTTCCTGCAGGCGCGGCTCGTGCTGGAACAGGCCGCCGGCACTCTGGACGTGACCGACCTCGAGGACATCAACCGCCTGCTGACCGCGGACAAGCCGATCGACAAGAGCATCGCCGCGCGCTGA
PROTEIN sequence
Length: 476
MPRRSLALALAAILLPAAAQADDLLQSYQNARSNDPQYAAAESSRLIGREGAVQARAALLPQINGSGSYQRTRSDGPSTQTQFDPNSGQPIRFSGNSSTTTNSRRYGIGVDQTLLDFGKLSRVRSQNALSQAADYQYDAAGQSLIVRTAQAYFNVLVALETLSASEASEAAFKKQYDFASKRLEVGLAPVTDVYEAQAQYDGARANTILSRNAVMDAYQALMEITGTPVASLKALPEDFKPSLPSKQDADAWVAQAIANNASLKALEMQLKSAEADVATARSAHLPTLTLSGGYNKNASWGDSTFSSSNPPFSSTFPISNESKGPSVGITLTVPIFSGGATQSRVRQALAQRDLVQDQLEQQRRALMRNTRNAYRGLLAGISEIEARRLALVSAQSAYDASQVGLEVGTRTVLDVLNNQRILFSAQQAYAQAKYNFLQARLVLEQAAGTLDVTDLEDINRLLTADKPIDKSIAAR*