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SCN18_25_8_15_R4_B_scaffold_632_23

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 27309..28001

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW59_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 231.0
  • Bit_score: 318
  • Evalue 3.70e-84
Membrane protein {ECO:0000313|EMBL:KGM51088.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 230.0
  • Bit_score: 327
  • Evalue 1.50e-86
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 231.0
  • Bit_score: 318
  • Evalue 1.00e-84

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGTTCGTCGCCATCCCGCCCCGCCCGCAGCGCCATTTCGTGTGGGCCACTCCCACCCTGTTCGCCCTGCTGTGGCTGGCCTACGTGCTGGCCGCCCTGCATGCGCCGGCCGGCAGCCTGGCCACCGCACTGGACTGGGGCGTGCTCAGCGGTGGCCTGGACAGTATGGACGACTGGCGGCGGGCACTGGCCGACGGCAGCGCGCTGCGCCTGGTCTCGGCCCTGTTTCTGCATGCCGACTGGCTGCACCTGCTGGGCAACCTGGTGTTCCTGCTGATCTTCGGGCTGCCGGCGGAACGGGTGATGGGCGGCTCGCGGCTGCTGCTGCTGTTCCTGCTCGGCGGCGCGGTGGCCAACCTGGCCGCGGTGCTGGCAATCGAAGCGCCGGACCGCATCATCATCGGCGCCAGCGGCGCGGTCTCGGCCCTGATCGGCGCCTACCTGGCCCTGCTCCCCGGCGCGCGCCTGGGCGTGGTGCTGCCGCTGGGCCTGTTCCTGCAGTTCGTGCGGGTACCGGCGTTCCTGCTGATCGGCCTGTGGGCGCTGCTGCAGGTCGGGTTTGCCTATGCCGGCCCGGCCTTCGGCGCGGTGGCCTGGCCGGCGCATATCGCCGGCTTCCTGTTCGGGGTCGTGTTCGCGCTGCTGACCAAGGCGGCGATCGCGCGCCGCCTGCGCCGCCAGCGCGGCTATTGA
PROTEIN sequence
Length: 231
MFVAIPPRPQRHFVWATPTLFALLWLAYVLAALHAPAGSLATALDWGVLSGGLDSMDDWRRALADGSALRLVSALFLHADWLHLLGNLVFLLIFGLPAERVMGGSRLLLLFLLGGAVANLAAVLAIEAPDRIIIGASGAVSALIGAYLALLPGARLGVVLPLGLFLQFVRVPAFLLIGLWALLQVGFAYAGPAFGAVAWPAHIAGFLFGVVFALLTKAAIARRLRRQRGY*