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rifoxya1_sub10_scaffold_6_12

Organism: rifoxya1_sub10_Archaea_w_16S

partial RP 24 / 55 BSCG 6 / 51 ASCG 7 / 38
Location: 5439..6113

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=RBG_13_Pacearchaeota_33_26_curated UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 218.0
  • Bit_score: 318
  • Evalue 6.60e-84
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 222.0
  • Bit_score: 181
  • Evalue 2.50e-43
putative exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 alias=gwa2_scaffold_111_113 id=5041548 tax=GW2011_AR20 species=Thermococcus kodakarensis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 223.0
  • Bit_score: 181
  • Evalue 8.90e-43

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Taxonomy

RBG_13_Pacearchaeota_33_26_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 675
ATGGTTGAGGAAAATAAAAGGCAAGTTGTAATCCCGGGAGAAATTATAAATTCTGGTGTTGATTTTCTTCCTGGAGAAGGAACTGAAAAGCGAGGGGACGATATTGTTTCTTTGCGATATGGTTTATCTGAAGAGAAAAATAATTTAGTGAAGGTTATTCCTTTGTCTGGAACTTATATTCCTCGACGAGGAAATGTGGTTATTGGAAAGGTTGAACTCTTGACATTTAATGGTTGGGTTATTGATATTGGTGCTCCTGAAAATGGGTTCTTGTCTTTAATGGAAGTTCCAAGATATGTTAACAAAAACGCTTTGGACGAGGTTATGGATATCGGGGATATGGTTGTTGCGAATATTTGGTCAATAAATAAACGGGGCGTTGATTTGAGTTTGAAGTCTCGTGGGCTTGGGAAAATTGATGAGGGAATTATTGTGAAAGTTAATCCGAATAAAGTTCCGAGAATTATTGGAAAGGAAGGGAGCATGATAAATTTAATAAAGGACAATACAGGTTGTAGTATGACTGTTGGACAAAACGGATTTGTTTGGATTCAAGGGGATAAAATTGACGACGAAGTTTTAGCGAAAAACGCGGTTGAATTTATTTCGGAAAATTCTTTTGTTTCTGGTTTGACTGAAGAAGTAATTAAATGGTTTGGAGAAAATAAGAGATGA
PROTEIN sequence
Length: 225
MVEENKRQVVIPGEIINSGVDFLPGEGTEKRGDDIVSLRYGLSEEKNNLVKVIPLSGTYIPRRGNVVIGKVELLTFNGWVIDIGAPENGFLSLMEVPRYVNKNALDEVMDIGDMVVANIWSINKRGVDLSLKSRGLGKIDEGIIVKVNPNKVPRIIGKEGSMINLIKDNTGCSMTVGQNGFVWIQGDKIDDEVLAKNAVEFISENSFVSGLTEEVIKWFGENKR*