ggKbase home page

ERMZT718_2_curated_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT718_2_curated_scaffold_134_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21..1028)
-----------------
DNA (1008bp)
protein (336aa)
ABC-type sugar transport systems, ATPase component protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8J0L4_HERSS
sugar ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMZT718_2_curated_scaffold_134_2
unknown

Not on your lists

comp(1180..1896)
-----------------
DNA (717bp)
protein (239aa)

This feature has no annotations

ERMZT718_2_curated_scaffold_134_3
unknown

Not on your lists

comp(2104..2283)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

ERMZT718_2_curated_scaffold_134_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..2507)
-----------------
DNA (207bp)
protein (69aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J3CRB0_9BURK
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMZT718_2_curated_scaffold_134_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2744..3076
-----------------
DNA (333bp)
protein (111aa)
TPR repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BU0_POLSJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABE44002.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
ERMZT718_2_curated_scaffold_134_6
unknown

Not on your lists

comp(3089..3247)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

ERMZT718_2_curated_scaffold_134_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3322..4323
-----------------
DNA (1002bp)
protein (334aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z348_9BACT
filamentation induced by cAMP protein Fic
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMZT718_2_curated_scaffold_134_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4352..5455
-----------------
DNA (1104bp)
protein (368aa)
Esterase n=1 Tax=mine drainage metagenome RepID=T0Y4F4_9ZZZZ
putative esterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMZT718_2_curated_scaffold_134_9
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5460..5891)
-----------------
DNA (432bp)
protein (144aa)
Putative signal-transduction protein containing cAMP-binding and CBS domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CF01_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMZT718_2_curated_scaffold_134_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6001..7608
-----------------
DNA (1608bp)
protein (536aa)
TPR repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BU0_POLSJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABE44002.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
ERMZT718_2_curated_scaffold_134_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7722..8150
-----------------
DNA (429bp)
protein (143aa)
Heat shock protein Hsp20 id=2009793 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
heat shock protein Hsp20
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT718_2_curated_scaffold_134_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8257..9144
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE32_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMZT718_2_curated_scaffold_134_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9141..9809
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE32_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMZT718_2_curated_scaffold_134_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9972..10181
-----------------
DNA (210bp)
protein (70aa)
Cold shock-like protein CspA n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYY5_CUPNN
cspA; cold shock-like protein CspA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMZT718_2_curated_scaffold_134_15
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10245..11816
-----------------
DNA (1572bp)
protein (524aa)
heme ABC transporter ATP-binding protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000317D1A6
uup; ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMZT718_2_curated_scaffold_134_16
unknown

Not on your lists

comp(11905..12021)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

ERMZT718_2_curated_scaffold_134_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12053..12751)
-----------------
DNA (699bp)
protein (233aa)
Tax=RBG_16_Chloroflexi_51_9_curated
ERMZT718_2_curated_scaffold_134_18
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12709..13704)
-----------------
DNA (996bp)
protein (332aa)
Putative lipoprotein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MS65_BORBM
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCJ62274.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
ERMZT718_2_curated_scaffold_134_19
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13812..15572
-----------------
DNA (1761bp)
protein (587aa)
galactose oxidase precursor (EC:1.1.3.9)
Putative Galactose oxidase {ECO:0000313|EMBL:CAQ69504.1}; EC=1.1.3.9 {ECO:0000313|EMBL:CAQ69504.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Putative Galactose oxidase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R195_CUPTR
ERMZT718_2_curated_scaffold_134_20
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15577..15996)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WAG4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB90741.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
ERMZT718_2_curated_scaffold_134_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16084..16698
-----------------
DNA (615bp)
protein (205aa)
Glutathione S-transferase domain n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEP2_METS4
glutathione S-transferase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMZT718_2_curated_scaffold_134_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16748..17296
-----------------
DNA (549bp)
protein (183aa)
Small transmembrane protein of the aromatic acids transporter n=2 Tax=Comamonas RepID=S6CBZ0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT718_2_curated_scaffold_134_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17289..18764
-----------------
DNA (1476bp)
protein (492aa)
Putative uncharacterized protein id=2786735 bin=GWC2_Syntrophus__56_31 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMZT718_2_curated_scaffold_134_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18828..19559
-----------------
DNA (732bp)
protein (244aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMZT718_2_curated_scaffold_134_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19609..20568
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121U5_POLSJ
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABE46697.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
ERMZT718_2_curated_scaffold_134_26
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20561..21997
-----------------
DNA (1437bp)
protein (479aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZT1_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMZT718_2_curated_scaffold_134_27
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21979..23001)
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PJE5_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
ERMZT718_2_curated_scaffold_134_trna_1
unknown

Not on your lists

comp(23043..23115)
-----------------
DNA (73bp)
transferRNA Lys
ERMZT718_2_curated_scaffold_134_28
unknown

Not on your lists

comp(23517..23879)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

ERMZT718_2_curated_scaffold_134_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24174..24683
-----------------
DNA (510bp)
protein (170aa)
PhnB n=1 Tax=Coxiella burnetii (strain Dugway 5J108-111) RepID=A9KDY8_COXBN
phnB; PhnB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying items 1-30 of 65 in total

View Taxonomy