ggKbase home page

ERMZT840_2_curated_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_8_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

125..1336
-----------------
DNA (1212bp)
protein (404aa)
ATP-dependent RNA helicase RhlE n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXJ0_JANMA
rhlE; ATP-dependent RNA helicase
Tax=RBG_16_Acidobacteria_68_9_curated
ERMZT840_2_curated_scaffold_8_2
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(1396..1689)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T082_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY75865.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
ERMZT840_2_curated_scaffold_8_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1699..2988)
-----------------
DNA (1290bp)
protein (430aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14429148 bin=bin3_NC10 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin3_NC10 organism_group=NC10
citrate synthase (EC:2.3.3.1)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMZT840_2_curated_scaffold_8_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3255..3755
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036D07B8
phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_8_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3759..5624)
-----------------
DNA (1866bp)
protein (622aa)
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase domain-containing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5688..8489
-----------------
DNA (2802bp)
protein (934aa)
Peptidase M16 domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE46_RHOMR
Peptidase M16 domain protein {ECO:0000313|EMBL:AEN72038.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
peptidase M16 domain-containing protein
ERMZT840_2_curated_scaffold_8_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8561..9829
-----------------
DNA (1269bp)
protein (423aa)
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_8_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9829..12288
-----------------
DNA (2460bp)
protein (820aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000348677C
LmbE family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_9
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12278..13372
-----------------
DNA (1095bp)
protein (365aa)
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein n=1 Tax=Desmospora sp. 8437 RepID=F5SGB3_9BACL
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
extracellular solute-binding protein
ERMZT840_2_curated_scaffold_8_10
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

13369..14337
-----------------
DNA (969bp)
protein (323aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000381924B
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIZ46415.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
ERMZT840_2_curated_scaffold_8_11
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14331..15962
-----------------
DNA (1632bp)
protein (544aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
iron ABC transporter permease
ERMZT840_2_curated_scaffold_8_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15959..17185
-----------------
DNA (1227bp)
protein (409aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMZT840_2_curated_scaffold_8_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17182..18756
-----------------
DNA (1575bp)
protein (525aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_8_14
unknown

Not on your lists

18761..19144
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_8_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19141..20910)
-----------------
DNA (1770bp)
protein (590aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT
protein kinase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_8_16
unknown

Not on your lists

comp(20959..21168)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_8_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21200..22225)
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381D6BA
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Protein of unknown function DUF457, transmembrane
ERMZT840_2_curated_scaffold_8_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22286..26167
-----------------
DNA (3882bp)
protein (1294aa)
Glycoside hydrolase, family 38 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZX7_RUBXD
glycoside hydrolase family 38
Glycoside hydrolase family 38 {ECO:0000313|EMBL:AHG91178.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_8_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26167..26793
-----------------
DNA (627bp)
protein (209aa)
Esterase/lipase, putative n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H763_SALRM
esterase/lipase
Esterase/lipase, putative {ECO:0000313|EMBL:CBH23868.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
ERMZT840_2_curated_scaffold_8_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26783..27625)
-----------------
DNA (843bp)
protein (281aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
ABC-type transporter, integral membrane subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27622..28599)
-----------------
DNA (978bp)
protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S5I0_PROA2
ABC-type transporter, integral membrane subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

28642..30123
-----------------
DNA (1482bp)
protein (494aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT
ABC-type transporter, periplasmic subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30165..31133
-----------------
DNA (969bp)
protein (323aa)
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
GHMP kinase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6FA7D
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31127..33928
-----------------
DNA (2802bp)
protein (934aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
Heparinase II/III family protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_8_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

33925..34677
-----------------
DNA (753bp)
protein (251aa)
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

34637..35788
-----------------
DNA (1152bp)
protein (384aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_8_27
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35785..36354)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU58_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA08858.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ERMZT840_2_curated_scaffold_8_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

36454..37254
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_8_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

37254..38024
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_8_30
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38120..38887
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000380DAFC
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KFM95769.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
dihydrodipicolinate synthetase
Displaying items 1-30 of 242 in total

View Taxonomy