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ERMZT840_2_curated_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_12_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..1915
-----------------
DNA (1914bp)
protein (638aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=KUP_MYXXD
kup; potassium uptake protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_12_2
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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1932..2390
-----------------
DNA (459bp)
protein (153aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RHH0_9CYAN
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AFY56903.1}; Flags: Precursor;; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
ERMZT840_2_curated_scaffold_12_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2428..4440)
-----------------
DNA (2013bp)
protein (671aa)
Carbon starvation protein CstA n=1 Tax=Desmospora sp. 8437 RepID=F5SAM8_9BACL
carbon starvation protein CstA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_12_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4584..5378
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L710_9BACT
short-chain dehydrogenase/reductase family oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_12_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5437..6057
-----------------
DNA (621bp)
protein (207aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6054..7082
-----------------
DNA (1029bp)
protein (343aa)
icd1; isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QIE4_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_12_7
unknown

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7072..7347
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_8
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7344..8726
-----------------
DNA (1383bp)
protein (461aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HJ83_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV30453.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
ERMZT840_2_curated_scaffold_12_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8723..9577
-----------------
DNA (855bp)
protein (285aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR5_RUBXD
Calcineurin-like phosphoesterase superfamily domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9706..10893
-----------------
DNA (1188bp)
protein (396aa)
Glutaryl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA7_GEMAT
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_11
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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10928..12709
-----------------
DNA (1782bp)
protein (594aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK5_9BACT
hypothetical protein
Tax=GWA2_Ignavibacteriae_55_25_curated
ERMZT840_2_curated_scaffold_12_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12727..13461
-----------------
DNA (735bp)
protein (245aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA3_GEMAT
etfB; electron transfer flavoprotein subunit beta
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_12_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13458..14342
-----------------
DNA (885bp)
protein (295aa)
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit id=24469728 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Electron transfer flavoprotein alpha/beta-subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_14
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

14335..15981
-----------------
DNA (1647bp)
protein (549aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC:1.5.5.1)
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
ERMZT840_2_curated_scaffold_12_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15982..16770)
-----------------
DNA (789bp)
protein (263aa)
Sensor histidine kinase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U4A2_9DELT
sensor histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMZT840_2_curated_scaffold_12_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16860..17504)
-----------------
DNA (645bp)
protein (215aa)
Multiple antibiotic resistance MarC-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU42_KORVE
multiple antibiotic resistance MarC-like protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
ERMZT840_2_curated_scaffold_12_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17512..18348)
-----------------
DNA (837bp)
protein (279aa)
Diguanylate cyclase id=4516555 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diguanylate cyclase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
ERMZT840_2_curated_scaffold_12_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18348..19568)
-----------------
DNA (1221bp)
protein (407aa)
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4324808 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19565..20098)
-----------------
DNA (534bp)
protein (178aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B MobB n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G3H8_9DELT
molybdopterin-guanine dinucleotide biosynthesis MobB region
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20080..20700)
-----------------
DNA (621bp)
protein (207aa)
Molybdopterin-guanine dinucleotide biosynthesis protein A
Molybdenum cofactor guanylyltransferase id=4153922 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_21
unknown

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comp(20702..21511)
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_22

Not on your lists

comp(21511..21930)
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
Marine sediment metagenome DNA, contig: S01H1_S29705 {ECO:0000313|EMBL:GAG36608.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CoA-binding domain-containing protein
ERMZT840_2_curated_scaffold_12_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21927..22655)
-----------------
DNA (729bp)
protein (243aa)
formate dehydrogenase family accessory protein (FdhD) id=14627924 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
formate dehydrogenase family accessory protein FdhD
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22681..23076)
-----------------
DNA (396bp)
protein (132aa)
6-pyruvoyl tetrahydropterin synthase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB96_GEMAT
6-pyruvoyl tetrahydrobiopterin synthase
6-pyruvoyl tetrahydropterin synthase family protein {ECO:0000313|EMBL:BAH39502.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMZT840_2_curated_scaffold_12_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23080..24081)
-----------------
DNA (1002bp)
protein (334aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E4F05
ABC transporter
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_26
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(24074..24769)
-----------------
DNA (696bp)
protein (232aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z131_DESAT
binding-protein-dependent transport systems inner membrane component
Tax=RBG_19FT_COMBO_JS1_35_14_curated
ERMZT840_2_curated_scaffold_12_27
unknown

Not on your lists

comp(24757..25500)
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25500..27008)
-----------------
DNA (1509bp)
protein (503aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
ERMZT840_2_curated_scaffold_12_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

27025..28134
-----------------
DNA (1110bp)
protein (370aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

28131..28484
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 291 in total

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