ggKbase home page

ERMZT840_2_curated_scaffold_12

Search features with annotation key words

Displaying items 211-240 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_12_207
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235176..236447
-----------------
DNA (1272bp)
protein (424aa)
MATE efflux family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN55_MYXSD
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AGC48992.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
ERMZT840_2_curated_scaffold_12_208
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

236871..239153
-----------------
DNA (2283bp)
protein (761aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB01_9BACT
putative TonB-dependent receptor
Putative TonB-dependent receptor {ECO:0000313|EMBL:CBK40410.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ERMZT840_2_curated_scaffold_12_209
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239141..240442
-----------------
DNA (1302bp)
protein (434aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEZ1_THIDA
BNR repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96860.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ERMZT840_2_curated_scaffold_12_210
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(240470..241759)
-----------------
DNA (1290bp)
protein (430aa)
phosphoribosylamine-glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase id=5800450 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Pacearch_04
ERMZT840_2_curated_scaffold_12_211
unknown

Not on your lists

241916..242137
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_212
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

242407..242694
-----------------
DNA (288bp)
protein (96aa)
Tax=RBG_16_Chloroflexi_64_43_curated
ERMZT840_2_curated_scaffold_12_213
unknown

Not on your lists

243415..246702
-----------------
DNA (3288bp)
protein (1096aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_214
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247076..247837)
-----------------
DNA (762bp)
protein (254aa)
Pyriform spidroin 1 (Fragment) n=2 Tax=Latrodectus hesperus RepID=C7T5D2_LATHE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMZT840_2_curated_scaffold_12_215
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247834..248799)
-----------------
DNA (966bp)
protein (322aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SI59_9DELT
ParA family protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
ERMZT840_2_curated_scaffold_12_216
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(248799..249779)
-----------------
DNA (981bp)
protein (327aa)
SMC domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
ERMZT840_2_curated_scaffold_12_217
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249854..251119
-----------------
DNA (1266bp)
protein (422aa)
L-sorbosone dehydrogenase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ADE15143.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ERMZT840_2_curated_scaffold_12_218
unknown

Not on your lists

comp(251116..251643)
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_219
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(251666..252424)
-----------------
DNA (759bp)
protein (253aa)
CAAX amino terminal protease n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026291FB
Abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AHG91541.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_12_220
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

252447..254612
-----------------
DNA (2166bp)
protein (722aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC98_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_12_221
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

254652..256037
-----------------
DNA (1386bp)
protein (462aa)
Amino acid/polyamine/organocation transporter, APC superfamily id=3948639 bin=GWF2_Melioribacter_38_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
amino acid permease
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
ERMZT840_2_curated_scaffold_12_222
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(256004..257098)
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Mycobacterium tuberculosis str. Haarlem RepID=T2CD02_MYCTU
Uncharacterized protein {ECO:0000313|EMBL:AKC37502.1}; TaxID=1774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae.;"
hypothetical protein
ERMZT840_2_curated_scaffold_12_223
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

257577..258272
-----------------
DNA (696bp)
protein (232aa)
branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase (EC:2.6.1.-)
Aminotransferase, class IV n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY00_RUBXD id=5223707 bin=16ft_combo_ws3_JS1 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_12_trna_3
unknown

Not on your lists

258316..258389
-----------------
DNA (74bp)
transferRNA His
ERMZT840_2_curated_scaffold_12_224
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

258466..259371
-----------------
DNA (906bp)
protein (302aa)
Cyclopropane-fatty-acyl-phospholipid synthase superfamily id=3468470 bin=GWC2_Nitrospirae_57_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
ERMZT840_2_curated_scaffold_12_trna_4
unknown

Not on your lists

259424..259496
-----------------
DNA (73bp)
transferRNA Trp
ERMZT840_2_curated_scaffold_12_225
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259567..261429)
-----------------
DNA (1863bp)
protein (621aa)
glpQ; glycerophosphoryl diester phosphodiesterase family protein (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Thiocapsa marina 5811 RepID=F9U6S0_9GAMM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EGV19946.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
ERMZT840_2_curated_scaffold_12_226
unknown

Not on your lists

261616..261792
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_227
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(261850..264936)
-----------------
DNA (3087bp)
protein (1029aa)
ppk; Polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Streptomyces sp. CNT302 RepID=UPI000370203B
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_228
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(264943..265707)
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA99_9SPHN
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_12_229
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(265704..266708)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FHQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09809.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
ERMZT840_2_curated_scaffold_12_230
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(266753..267952)
-----------------
DNA (1200bp)
protein (400aa)
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Conserved protein of unknown function (membrane protein with a C-terminal Diguanylate cyclase domain)
Tax=CSP1_5_NC10
ERMZT840_2_curated_scaffold_12_trna_5
unknown

Not on your lists

268043..268115
-----------------
DNA (73bp)
transferRNA Glu
ERMZT840_2_curated_scaffold_12_trna_6
unknown

Not on your lists

268124..268195
-----------------
DNA (72bp)
transferRNA Glu
ERMZT840_2_curated_scaffold_12_231
unknown

Not on your lists

comp(268206..268889)
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_12_232
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(268938..269753)
-----------------
DNA (816bp)
protein (272aa)
diguanylate cyclase id=7202273 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
GAF sensor-containing diguanylate cyclase
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying items 211-240 of 291 in total

View Taxonomy