ggKbase home page

GD18-4_B1_scaffold_12905

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_12905_1
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2029)
-----------------
DNA (2028bp)
protein (676aa)
YD repeat protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJP4_9GAMM
wapA_[H]; YD repeat protein
YD repeat protein {ECO:0000313|EMBL:AGA32795.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
GD18-4_B1_scaffold_12905_2
unknown

Not on your lists

comp(2146..3198)
-----------------
DNA (1053bp)
protein (351aa)

This feature has no annotations

GD18-4_B1_scaffold_12905_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

3459..3908
-----------------
DNA (450bp)
protein (150aa)
Biotin carboxylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIY7_CHLTF
biotin carboxylase
Biotin carboxylase {ECO:0000313|EMBL:AEP12755.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
GD18-4_B1_scaffold_12905_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4033..4569)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XS65_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35231.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_12905_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4548..8402)
-----------------
DNA (3855bp)
protein (1285aa)
Putative pilin biogenesis protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQN8_SORC5
Type IV fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EYF01714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pilin biogenesis protein
GD18-4_B1_scaffold_12905_6
unknown

Not on your lists

comp(8466..9158)
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

GD18-4_B1_scaffold_12905_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9152..10456)
-----------------
DNA (1305bp)
protein (435aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX82_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35233.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_12905_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10456..11595)
-----------------
DNA (1140bp)
protein (380aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQQ4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92179.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_12905_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11830..13113
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQR1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01709.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_12905_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13288..14334
-----------------
DNA (1047bp)
protein (349aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F071_SORC5
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EYF03978.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_12905_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14353..15825
-----------------
DNA (1473bp)
protein (491aa)
Putative ferredoxin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F073_SORC5
napG; ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:CAN91243.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 11 items

View Taxonomy