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GD18-4_B1_scaffold_175199

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_175199_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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265..2037
-----------------
DNA (1773bp)
protein (591aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNE3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71529.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
GD18-4_B1_scaffold_175199_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2478..4010
-----------------
DNA (1533bp)
protein (511aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV62_SORCE
hypothetical protein
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_175199_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(4198..5490)
-----------------
DNA (1293bp)
protein (431aa)
Amino acid permease-associated region n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZB6_OPITP
amino acid permease-associated protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GD18-4_B1_scaffold_175199_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5490..6125)
-----------------
DNA (636bp)
protein (212aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8C9_9BACT
protein-L-isoaspartate O-methyltransferase
GD18-4_B1_scaffold_175199_5
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

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6491..6799
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YZD7_9CHLO
Uncharacterized protein {ECO:0000313|EMBL:EIE23756.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;"
GD18-4_B1_scaffold_175199_6

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6982..8910
-----------------
DNA (1929bp)
protein (643aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JQV0_BURP8
Uncharacterized protein {ECO:0000313|EMBL:KKN92962.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PAS domain S-box
GD18-4_B1_scaffold_175199_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8910..10076
-----------------
DNA (1167bp)
protein (389aa)
Sensor protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FD18_STIAD
Response regulator receiver protein {ECO:0000313|EMBL:KFE65262.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
sensor protein
GD18-4_B1_scaffold_175199_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10177..12192
-----------------
DNA (2016bp)
protein (672aa)
WD40-like beta Propeller containing protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CKA9_9LEPT
TolB protein {ECO:0000313|EMBL:AKF02975.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_175199_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12236..18688)
-----------------
DNA (6453bp)
protein (2151aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GU15_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF00747.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_175199_10
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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18856..19386
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein id=3748122 bin=GWF2_Ignavibacteria_35_20 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
GD18-4_B1_scaffold_175199_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19498..20454
-----------------
DNA (957bp)
protein (319aa)
GAF sensor-containing diguanylate cyclase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SFP1_9SPHN
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AKF06020.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
diguanylate cyclase
GD18-4_B1_scaffold_175199_12
Pleurotus ostreatus, Pleurotus, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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20396..20719
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein, partial n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B15E7
Uncharacterized protein {ECO:0000313|EMBL:KDQ28741.1}; TaxID=1137138 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Pleurotaceae; Pleurotus.;" source="Pleurotus ostreatus PC15.;"
TolA protein
Displaying 12 items

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