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GD18-4_B1_scaffold_846903

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_846903_1
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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1..783
-----------------
DNA (783bp)
protein (261aa)
Tax=BJP_IG2069_Spirochaetales_48_31
GD18-4_B1_scaffold_846903_2
unknown

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938..1978
-----------------
DNA (1041bp)
protein (347aa)

This feature has no annotations

GD18-4_B1_scaffold_846903_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(1984..2979)
-----------------
DNA (996bp)
protein (332aa)
Cytochrome bd ubiquinol oxidase subunit II n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AX76_HERA2
cytochrome bd ubiquinol oxidase subunit II
Cytochrome bd ubiquinol oxidase subunit II {ECO:0000313|EMBL:ABX04884.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
GD18-4_B1_scaffold_846903_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(2976..4316)
-----------------
DNA (1341bp)
protein (447aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AX75_HERA2
cytochrome bd ubiquinol oxidase subunit I
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ABX04883.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
GD18-4_B1_scaffold_846903_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4320..4958)
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=2 Tax=Aspergillus niger RepID=G3XLH3_ASPNA
DnaJ domain protein {ECO:0000313|EMBL:AKF06689.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_846903_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4964..7267)
-----------------
DNA (2304bp)
protein (768aa)
Chaperone protein DnaK n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PLJ7_9DELT
Chaperone protein DnaK {ECO:0000313|EMBL:AKF06688.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
chaperone protein DnaK
GD18-4_B1_scaffold_846903_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7414..8631
-----------------
DNA (1218bp)
protein (406aa)
Putative phosphoesterase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R0P0_9DELT
Metallophosphoesterase {ECO:0000313|EMBL:EYF00943.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
putative membrane-attached phosphoesterase
GD18-4_B1_scaffold_846903_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8703..10502
-----------------
DNA (1800bp)
protein (600aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9D2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99163.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_846903_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10686..12650
-----------------
DNA (1965bp)
protein (655aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EV70_SORC5
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:EYF01287.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_846903_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12667..14199
-----------------
DNA (1533bp)
protein (511aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN97830.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN97830.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5R7_SORC5
GD18-4_B1_scaffold_846903_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14232..14903
-----------------
DNA (672bp)
protein (224aa)
Succinate dehydrogenase cytochrome b558 subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QV51_9DELT
Succinate dehydrogenase {ECO:0000313|EMBL:AKF79779.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
sdhC; succinate dehydrogenase cytochrome b558 subunit
GD18-4_B1_scaffold_846903_12
unknown

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15244..15903
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

GD18-4_B1_scaffold_846903_13
unknown

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comp(15954..16286)
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

GD18-4_B1_scaffold_846903_14
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(16357..16965)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W2I5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKD35528.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
GD18-4_B1_scaffold_846903_15
unknown

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comp(16962..17399)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

GD18-4_B1_scaffold_846903_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17792..19249)
-----------------
DNA (1458bp)
protein (486aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZ52_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06334.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_846903_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19472..21106)
-----------------
DNA (1635bp)
protein (545aa)
Signal recognition particle protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZ48_SORC5
Signal recognition particle, subunit Ffh SRP54 {ECO:0000313|EMBL:EYF06331.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ffh; signal recognition particle protein
GD18-4_B1_scaffold_846903_18
Gregarina niphandrodes, Gregarina, Eugregarinorida, Gregarinasina, Apicomplexa, Eukaryota

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comp(21300..22661)
-----------------
DNA (1362bp)
protein (454aa)
PPE family protein n=1 Tax=Mycobacterium tuberculosis W-148 RepID=F2V8V8_MYCTU
Putative glutamine-rich protein 2 {ECO:0000313|EMBL:EZG78171.1}; TaxID=110365 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Gregarinasina; Eugregarinorida; Gregarinidae; Gregarina.;" source="Gregarina niphandrodes.;"
PPE family protein
GD18-4_B1_scaffold_846903_19
Eimeria maxima, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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comp(22751..23881)
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria maxima RepID=U6M1M8_EIMMA
Uncharacterized protein {ECO:0000313|EMBL:CDJ57926.1}; Flags: Fragment;; TaxID=5804 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria maxima (Coccidian parasite).;"
transcriptional regulator
Displaying 19 items

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