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GD18-4_B1_scaffold_1607777

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1607777_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(462..2084)
-----------------
DNA (1623bp)
protein (541aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y079_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37550.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1607777_2
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

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comp(2122..2637)
-----------------
DNA (516bp)
protein (172aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1532906 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
Peptidylprolyl isomerase (EC:5.2.1.8)
peptidylprolyl isomerase n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000366784D
GD18-4_B1_scaffold_1607777_3
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

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2916..3461
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein id=1735565 bin=GWA2_Elusi-like_A8_64_40 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
Tax=GWB2_Elusimicrobia_63_16_curated
GD18-4_B1_scaffold_1607777_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3490..5712)
-----------------
DNA (2223bp)
protein (741aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTD9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33853.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1607777_5
unknown

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comp(5820..6437)
-----------------
DNA (618bp)
protein (206aa)

This feature has no annotations

GD18-4_B1_scaffold_1607777_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6457..8613)
-----------------
DNA (2157bp)
protein (719aa)
Methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9M0_SORC5
methyltransferase
Methyltransferase {ECO:0000313|EMBL:CAN99204.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1607777_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8610..9509)
-----------------
DNA (900bp)
protein (300aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative phosphatidylserine decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9M3_SORC5
phosphatidylserine decarboxylase
GD18-4_B1_scaffold_1607777_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9611..11197)
-----------------
DNA (1587bp)
protein (529aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9N1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99209.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_1607777_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11194..14067)
-----------------
DNA (2874bp)
protein (958aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YH14_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42173.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_1607777_10
unknown

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14291..14836
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

GD18-4_B1_scaffold_1607777_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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14915..16948
-----------------
DNA (2034bp)
protein (678aa)
prolyl oligopeptidase family protein (EC:3.4.-.-)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rheinheimera sp. A13L RepID=F7NZ42_9GAMM id=5225010 bin=16ft_combo_ws3_JS1 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
GD18-4_B1_scaffold_1607777_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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17217..17513
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein id=12554372 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
GD18-4_B1_scaffold_1607777_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17549..19330)
-----------------
DNA (1782bp)
protein (594aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6Q2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA90905.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GD18-4_B1_scaffold_1607777_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(19412..20782)
-----------------
DNA (1371bp)
protein (457aa)
NADH dehydrogenase, FAD-containing subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG27_SINAD
NADH dehydrogenase, FAD-containing subunit
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AGA27621.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_1607777_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20908..21786
-----------------
DNA (879bp)
protein (293aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Variovorax sp. CF313 RepID=J3CSU5_9BURK
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL77511.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
alpha/beta hydrolase fold protein
GD18-4_B1_scaffold_1607777_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21847..26994
-----------------
DNA (5148bp)
protein (1716aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=2 Tax=Chloroflexus RepID=A9WFF1_CHLAA
Uncharacterized protein {ECO:0000313|EMBL:EYF02887.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
peptidase S8/S53 subtilisin kexin sedolisin
Displaying 16 items

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