ggKbase home page

GD18-4_B1_scaffold_1334202_39

Organism: GD2018-4_B1_QB3_180703_Uhrbacteria_48_14

near complete RP 41 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 33887..37105

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 1064.0
  • Bit_score: 1274
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=uncultured bacterium RepID=K2C0M7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 1055.0
  • Bit_score: 1495
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 1055.0
  • Bit_score: 1548
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Uhrbacteria_48_12 → Uhrbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3219
ATGACTACATCGAAGCATGATCATGCGGCGCAAGGCAGGCGGGTTTACTTCACAAAAGAGCATAATGTTATTCCACTGCCCCACTTGATTGAAGTTCAAATTGATTCCTACCGTTGGTTTTGCGAGGCGGGACTGCGTGAGCTATTTGACGAGATTTCTCCGATTCGCGATATCGCATCCAGAGATTTGGAGCTCAACTTCCATGATTTTTATTTTGATGAGCCGAAGTTCGACGAGAAGACAAGCATGTCGAAAAATTTAAGCTTTGAGACTGCTTTGTGGGTAAAGACGAAGCTGGTGAATAAACGAACCGGCGAAGAGCGCGATCAGGATATCTATCTCGGCGATTTTCCCGTAATGACGGATCGCGGCACATTCATTATTAACGGCGTGGAGCGTGTTGTGGTATCCCAGTTGATTCGGTCGGCTGGGGTATTTTTTTCATCGGAAGTATTTCGCGGGTCGGACCGCCGATATTACGGAGCGAAGATTATTCCTAATCGAGGCGCATGGCTTGAATTCGAGACCGATGAAAATAATTGCATCTGGGTAAAAATCGACCGTAAGAGAAAAGTCGCCGTCACTTCCTTACTGCGCGCTTTCGGCTATGGATCAGACGAGGAAATTGTACGGCTGTTTACATCGATAGATACCGACGAAGACCGCAGGCACATCGAAGCAACGATCGAACGTGATCTGGCAAAGACAGAAGAAGAAGGGCTTGTGGAAATCTATAAGAGAATCCGTCCCGGTGATCTCGCGACTCCTGATAACGCGCGTACGTTGATCTATGACATGTTTTTTTGGTTTGATCGGTATGATCTTGGCCGAGTCGGGCGGCATAAAATGAATCTTCGTTTTGGGCTCGACCATTCAACGAAGACAAAAGAGGGCCGCGTACTTCACAAAGAAGATCTCGTGGCGATCATTTCTGAAATCATTTCGTACAATAATTCGCAAAAAGAACCTGATGACATTGATCACTTGGGCAATCGGCGCATCCGCGCGGTAGGTGAATTGGTTCAGAATAAATTTCGCGTCGGATTGGGGCGCATGGTGCGTATCGTGCGCGATCGCATGAGCACGCTTGATATCGATGCCATGACTCCGGCAAAATTGATCAACGCGCGGCCGGTGATCATTGCCGTAAAAGAATTTTTTATGTCATCGCAGTTATCCCAATTCATGGATCAGACAAACCCGTTGTCCGAACTTGAACATAAGCGGCGTATCTCGGCGCTCGGTCCGGGCGGTTTGAGCAGAGAGCGCGCAGGCTTTGAGGTGCGCGACGTACACCCGACCCATTATGGCCGTATTTGCCCCATAGCTACGCCGGAAGGCCCTAATATCGGTCTCGTGGGCCACCTTGCCTCGTACGCGAGATTGAATGAATATGGGTTTATTGAAACCCCGTTCCGTACCATTGAAAAAGACACGAACTCAAAACCGATTGTCACGAAACATGTGCACTATCTTGATGCTTTCACTGAAGAACGAAACGTCACCACAGCCGCGACTACGCCTTTGGACGCGGACGGCTACTTTATCAATGATAAAGCCGAGGTTCGCAAATACGGACAGCCGGCGCTCGATCAGGTGGATAATGTCCACTACATGGATGTTGCTCCAAACCAAATCGTAAGCATTTCCACATCTCTTATCCCGTTTCTTGAGCATGATGACGCGGCGCGCGCTCTCATGGGCTCCAATATGCAACGCCAAGCTGTCCCGTTGGTGCGTCCGGAAGCTCCTCGCATCGGAACCGGCGTGGAAGCGCGAGTGGCGCATGATTCAGGCCGTTTGCTTATCAGCGATACGGATGGCGTCGTTGTCGGCGTAGAGGGTGATGAGGTGACGATTCAAAAAGATGATGGCGACATCATAAACTACGCTCTTGCGAAATTTGCGCGCTCCAATGCTTCAACCTGTATCAATCAAAAAGTTCTTTGCCATAAAGGCGACCGCGTGGCGGATGGAGCTACCCTTGCTGACGGCTCATCAACGGAAAACGGAGAGCTTGCGCTCGGTCAGAATGTGCTCGTCGCCTTCATGTCCTGGGAGCTCGGAAATTACGAAGATGCTATTTTGATATCCGAGCGATTGGTGCACGATGATCGCTTCACATCCATTCATATCGAAAATTATACTTTGGCGGTCCGTGATACAAAGCTGGGACCGGAAGTAATTACGCGCGACATACCCAATGTCGGTGAAGAAAAATTGAAAGACTTGGATGAAGATGGCGTCGTTCGCATCGGCGCTGAAGTATCTTCCGGTGATATCCTTGTCGGTAAGATCACGCCGAAGGGCGAGACCGAGCTTTCTCCGGAGGAGAAATTGCTCCGCGCTATTTTTGGAGAAAAAGCAAAGGATACGCGTGATTCTTCCTTATATCTCGAGCACGGCGAACACGGCAAGGTAATCGATGTAAAAGTATTTTCGCGCGAAAATGGAGACAAAATGCCAGCCGGCGTAATCAAAACAGTCCAAGTGACCGTTGCGCATCTTCGCAAGATACAGGTTGGAGATAAAATGGCCGGACGCCACGGCAACAAGGGTGTTATTTCCCGTGTTGTCTCCATGGAGGATATGCCGCATCTGGAAGACGGAACACCGGTTGACATCGTGTTGAGTCCGCTTGGTGTTATATCGCGTATGAATCTCGGGCAGCTCCTTGAGACGCATCTCGGCCTGGCGGCTCGCGCGATGAATTTGCATATCGCAACGCCCGCTCTCGATGGAATTCCCGAAGAGGTGATTCGGGAACAATTAAGCAAAGCGGGTTTTCCAAGCGACGGGAAACTCCAATTGATCGATGGGAGGACAGGCGAACCCTTTAAGGAAAAAAGCGTAGTCGGCGTGATGTATATGATGAAGCTGATCCACATGGTGGAAGATAAAATCCATCAGCGGTCCATCGGTCCCTATTCTTTGATCACTCAACAACCGCTCGGGGGCAAGGCGCAATCCGGCGGACAGCGTTTCGGAGAAATGGAAGTGTGGGCGTTGGAAGCATACGGCGCGGCCCATACCCTGCAAGAGATTCTTACGATCAAATCCGACGACATTTCTGGCCGATCAAAAGCATACGAAGCAATCATCAAGGGCGAGAAAATAGTAAAGTCGAATGTCCCCGAAGCCTTTAACGTGCTCGTCAGAGAGCTCAAAGGGTTGGGGCTTGATGTCGAGCTGTTAAGGAGTAATCCAGAGGAGCAATAA
PROTEIN sequence
Length: 1073
MTTSKHDHAAQGRRVYFTKEHNVIPLPHLIEVQIDSYRWFCEAGLRELFDEISPIRDIASRDLELNFHDFYFDEPKFDEKTSMSKNLSFETALWVKTKLVNKRTGEERDQDIYLGDFPVMTDRGTFIINGVERVVVSQLIRSAGVFFSSEVFRGSDRRYYGAKIIPNRGAWLEFETDENNCIWVKIDRKRKVAVTSLLRAFGYGSDEEIVRLFTSIDTDEDRRHIEATIERDLAKTEEEGLVEIYKRIRPGDLATPDNARTLIYDMFFWFDRYDLGRVGRHKMNLRFGLDHSTKTKEGRVLHKEDLVAIISEIISYNNSQKEPDDIDHLGNRRIRAVGELVQNKFRVGLGRMVRIVRDRMSTLDIDAMTPAKLINARPVIIAVKEFFMSSQLSQFMDQTNPLSELEHKRRISALGPGGLSRERAGFEVRDVHPTHYGRICPIATPEGPNIGLVGHLASYARLNEYGFIETPFRTIEKDTNSKPIVTKHVHYLDAFTEERNVTTAATTPLDADGYFINDKAEVRKYGQPALDQVDNVHYMDVAPNQIVSISTSLIPFLEHDDAARALMGSNMQRQAVPLVRPEAPRIGTGVEARVAHDSGRLLISDTDGVVVGVEGDEVTIQKDDGDIINYALAKFARSNASTCINQKVLCHKGDRVADGATLADGSSTENGELALGQNVLVAFMSWELGNYEDAILISERLVHDDRFTSIHIENYTLAVRDTKLGPEVITRDIPNVGEEKLKDLDEDGVVRIGAEVSSGDILVGKITPKGETELSPEEKLLRAIFGEKAKDTRDSSLYLEHGEHGKVIDVKVFSRENGDKMPAGVIKTVQVTVAHLRKIQVGDKMAGRHGNKGVISRVVSMEDMPHLEDGTPVDIVLSPLGVISRMNLGQLLETHLGLAARAMNLHIATPALDGIPEEVIREQLSKAGFPSDGKLQLIDGRTGEPFKEKSVVGVMYMMKLIHMVEDKIHQRSIGPYSLITQQPLGGKAQSGGQRFGEMEVWALEAYGAAHTLQEILTIKSDDISGRSKAYEAIIKGEKIVKSNVPEAFNVLVRELKGLGLDVELLRSNPEEQ*