ggKbase home page

S5_GD2017_2_S2_scaffold_1197_21

Organism: GD2017-2_S2_QB3_180125_Parcubacteria_47_8

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: comp(18197..20149)

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 648.0
  • Bit_score: 644
  • Evalue 1.80e-182
ribonuclease R Tax=Anaerophaga thermohalophila RepID=UPI000237C4FE similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 645.0
  • Bit_score: 653
  • Evalue 1.80e-184
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 655.0
  • Bit_score: 706
  • Evalue 3.30e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_RIF_OD1_10_44_12b → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGAAAGAAAAAAAGAAAAAAACGGAAGAACGATGGATTGAAGGAAATATCTTCCTTACCGCAAAGGCTGTGGGGTATGTTCCCGCCGAAGGTTTTGACGAGGATATCGAAATAGAAGAATCTTCTCTGAACACCGCGCTTCATGGCGACCGCGTAAAACTACTTCTTCGCCCGTCCATCCCGAACAAACGACAAACCGGAGAAGTTGCCGAGGTACTTTTCCGCGCCAAAACGAACTTTGTCGGAAAGATCGAAAAAAAAGGCGGGACAACATTTCTTCTTCCCGATGACCGCCGGATGTACCGCGATATTTTCATCGCACCGCAAAACTCGAAGGATGTAGAAGACGGTCAAAAAGCGTTTGTGAAAATAAAAGAATGGACTGATCCGAAAAAAAGCCCGTCGGGAGAGGTGTTGCAGATACTCGGAAATCCGGGCGAAAACAACACCGAGATACAGGCGATAATTCTTGAGAAAGGGTTTGATACATCCTTTCCCGCAGGAGTGGAACGCGAAGCGGAAAAAATTTCGCGCATCATTGCTGATGAAGAAACCGCCAAACGGAAAGACTTCCGCGATGTGCTGACATTTACGATCGACCCGTTCGATGCAAAAGATTTCGATGATGCTATCTCCATTCAAACTCTTGAAAATGGCGACATTGAAGTCGGCGTCCACATCGCCGATGCTTCGTACTACGTGACGCCCGGTTCCGCCATTGACAAAGAGGCGGCATACCGCGGCACGAGCGTCTATCTCGTTGACCGCGTACTCCCCATGCTTCCGGAAGTCCTTTCAAACGACGTGTGCAGCCTGAAACCGAACGAAGACAAGCTCACATTCTCCGCCGTGTTCACGTTCGCAAAGAACGCAAAAGAAGCGGGCGTGTATCCGAAGATAGTGAGGAGCTGGTACGGACGGACAATCATACATTCAAACCGCCGCTTTACGTACGAAGAAGCGCAGGAAGTGCTCGATACGGGTAAAGGCGATTATGCAAGCGAAATACGCGAGCTTGATACTATTGCGGAAAATTTGAGCCGCGAACGATTCGCCGCAGGTTCCATCTCTTTTGAAAAAGACGAAATAAAAATCCTGCTCGACGAGAATGGGGTGGCGGTGAAAATTATAAAAAAGGAACGGACGCGGAGCCACAAGCTCATTGAAGACTTCATGCTGCTTGCCAACAAAAAAGTCGCGGAGCACATCGCAGAGATCGGAAAAAAAGAAGAGCGGCTGTTCGTGTACCGCGTCCACAACCAGCCGGATACCGAACGCCTGCGCGAACTTTCCATATTCCTGAAAACACTCGGCTTCTCTCTTAAAGTAGACGACGGGGGTAACATCTCGCCGAAAAATCTCAATGCGCTTCTTGAAGAAACCGCAGGCGGACAATTCCAAAATATCGTCCACACGACCGCGCTTCGCACTATGGCGAAAGCCACCTATTCCACCAAGAACATCGGGCACTTCGGACTCGGTTTTGAGCACTACACGCACTTCACTTCCCCGATACGCCGGTACCCCGACATTCTCGCCCACCGCTTACTTGAAGCGCATTTAAAAGACGGCAAGATTCCGGAGGAGCTGTGGCAAGAATACGAAACGATGCTCCGGTATGCTTCAGAGCGTGAAGTCTTCGCGGCAGACGCCGAACGCGCTTCCATTAAATACAAGCAGGTGGAATACATGCTTGATAAAGTCGGTGAGACTTTCAACGGCACCATCACAGGGGTCACGGAATGGGGTATTTACGTTGAGGATAAAGAAACGCTCGTTGAAGGCATGATCCGCCTGCGCGACCTGAAAGACGACTTCTACACCCTTGATGAAAAACACTATTGCCTTCTTGGCAAAAATACCAAAAAGAAATATACTTTAGGTGACAGTGTCTCGGTAAAACTTCTCCGCGCGGATATGAATGCGCGTACTCTTGATTTTATCTTTACATAA
PROTEIN sequence
Length: 651
MKEKKKKTEERWIEGNIFLTAKAVGYVPAEGFDEDIEIEESSLNTALHGDRVKLLLRPSIPNKRQTGEVAEVLFRAKTNFVGKIEKKGGTTFLLPDDRRMYRDIFIAPQNSKDVEDGQKAFVKIKEWTDPKKSPSGEVLQILGNPGENNTEIQAIILEKGFDTSFPAGVEREAEKISRIIADEETAKRKDFRDVLTFTIDPFDAKDFDDAISIQTLENGDIEVGVHIADASYYVTPGSAIDKEAAYRGTSVYLVDRVLPMLPEVLSNDVCSLKPNEDKLTFSAVFTFAKNAKEAGVYPKIVRSWYGRTIIHSNRRFTYEEAQEVLDTGKGDYASEIRELDTIAENLSRERFAAGSISFEKDEIKILLDENGVAVKIIKKERTRSHKLIEDFMLLANKKVAEHIAEIGKKEERLFVYRVHNQPDTERLRELSIFLKTLGFSLKVDDGGNISPKNLNALLEETAGGQFQNIVHTTALRTMAKATYSTKNIGHFGLGFEHYTHFTSPIRRYPDILAHRLLEAHLKDGKIPEELWQEYETMLRYASEREVFAADAERASIKYKQVEYMLDKVGETFNGTITGVTEWGIYVEDKETLVEGMIRLRDLKDDFYTLDEKHYCLLGKNTKKKYTLGDSVSVKLLRADMNARTLDFIFT*