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S35_SO-1_scaffold_710_43

Organism: Genasci_Feb2018_S35_SO-1_Roizmanbacteria_35_236

near complete RP 45 / 55 BSCG 44 / 51 ASCG 9 / 38
Location: 49626..50783

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 222..240 id=36496 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 394.0
  • Bit_score: 258
  • Evalue 1.00e-65
O-antigen polymerase {ECO:0000313|EMBL:KKQ07635.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 394.0
  • Bit_score: 258
  • Evalue 1.40e-65
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 23.1
  • Coverage: 416.0
  • Bit_score: 79
  • Evalue 2.30e-12

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Taxonomy

GWB1_OP11_36_5 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1158
ATGCGTATTTATCAACTGCTGACTTTCGCTGTTTTAGGATCAATTTTATTTTTTCCTTACCAATTAGATACACGGATTAATTACATTATTTTTATCTTTGGAGTCTTGCTATTACCCCTTTTTATTAAAAAAATCCCGCTTTTATTTCATGTCTTTAAAGAAGATTTAGCACGTAAAAACTACACTTCATTATTTTTTATTGGATTAATTATCTCTACCCTTATCTCAACTTTTTTTTCCATAAATCTCTCATCTAGTATTTTTTCCTTAATTCTGATTGTTACCTATTTTATTGTTTTTCATACTGCTAAATTTATTTTTCCTGATAATAAAGCCAAAAATAGACTAATAATTTTTTTTGTATTAATAAATTTTTTTCTGGCAATTATCTCCCTTTATTACACACTTATTAATTATGGTGATCACACATCAGGCGGAGTCAGTTTTATGCGAGTGTACTTTGGACATAATCATCTCTCGGCCCTTCTGCTTTTTTCAATTCCTTTAAGCTTTTATTTATTAACCTGTTTAAAACAAAAAATTTATAAATTATTTTTTTGGATAATCTTTGTTTTCTTAATGATAAGTCTTTACCTTACTTTTGCCCGCGTCTCAATTATCTCTTTATTAACAACTTTCCTGATTACTTTTTTCCTTTTATTTAAAATAAATAAAAGAATATTAATCTTATCTACATTGGTATCCTCAATTATCATTATCTTTATGCTTGCAACTTCAGTAAAGCGAGCTCAAGAATTAAAAATAAGAAAGTTCAATACACTAAGTTTATCTGTCAGACTAGGCTATTGGCAACAGTCTTTTGATAATTTTCTCCAGCATCCTTTAATAGGCTCTGGACCTGATACATTTCGGATTGTAAGCAAAAAAAGTCCGCGCAATATAAAACCCTATACTTTCTTTTCCCACAATTTATTTATTCAGTTGCTAACAGATATGGGCATTATCGGTTTTATTGCTAATTTAGGACTATTAATTTCAATAATAATTTCCTCTTTTAAAAAACTGCAAAAATCAACCCCTATGATTTATGCTATCTGGATCGGTATGACAGCATTAGTTATTAACGGATTATTTGATTATGATTGGCAGATAGCCAGTATTCCTTTTATCTTTTGGCTTCTGGCCGGAATATTGTAA
PROTEIN sequence
Length: 386
MRIYQLLTFAVLGSILFFPYQLDTRINYIIFIFGVLLLPLFIKKIPLLFHVFKEDLARKNYTSLFFIGLIISTLISTFFSINLSSSIFSLILIVTYFIVFHTAKFIFPDNKAKNRLIIFFVLINFFLAIISLYYTLINYGDHTSGGVSFMRVYFGHNHLSALLLFSIPLSFYLLTCLKQKIYKLFFWIIFVFLMISLYLTFARVSIISLLTTFLITFFLLFKINKRILILSTLVSSIIIIFMLATSVKRAQELKIRKFNTLSLSVRLGYWQQSFDNFLQHPLIGSGPDTFRIVSKKSPRNIKPYTFFSHNLFIQLLTDMGIIGFIANLGLLISIIISSFKKLQKSTPMIYAIWIGMTALVINGLFDYDWQIASIPFIFWLLAGIL*