ggKbase home page

S35_SO-1_scaffold_710_106

Organism: Genasci_Feb2018_S35_SO-1_Roizmanbacteria_35_236

near complete RP 45 / 55 BSCG 44 / 51 ASCG 9 / 38
Location: 119737..120621

Top 3 Functional Annotations

Value Algorithm Source
putative membrane protease subunit HflC id=24457739 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 289.0
  • Bit_score: 354
  • Evalue 1.00e-94
putative membrane protease subunit HflC similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 238.0
  • Bit_score: 263
  • Evalue 5.10e-68
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 286.0
  • Bit_score: 430
  • Evalue 1.20e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Roizmanbacteria_39_9 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 885
ATGGAAATTACTTTAGTTATTCTTGTGATAGGATCGGTTATTGCTCTAATAACTCTTCTTATGTCCGTTAAAATCATAAACCAAGCGGAAAAAGGAATAGTCTTGCGCTTAGGAAAATTTAATCGTGTAGTTGAGGCTGGGTTAAATCTGATTATTCCTTATATTGATTCTTTAATGAAAGTTGATGTTAGGGAGAGAGTTATTAATGTTGAACCCCAAAAGGTAATTACCAAAGATAACGTAAGTGTTACGGTAGATGCAGTTATTTACTACAAAGTGGTTGATCCTGTAAAAGCGGAGTTTGAAGTTGAAGATTTTGATACTGCGGCTACCACTTTGGCTCAAACAAATCTAAGAAATGTTGTTGGTGATAAAACCTTAGACGAAACTTTAACCGCTCGTGATGTCATCAATACCAGCTTGAGGAATGTGCTTGATGAGGCCACTCATGGATGGGGTGTCAAAGTGACTCGCGTTGAGGTGCAAAAAATTGAGCCGCCTCCTGAGATCAGTGAGGCCATGAGTTTGCAGATGAGAGCTGAGCGGGAAAAAAGAGCCAAAATATTGCAGGCTGAAGGCATTAGACAAAGTTTTATCCTCGAGGCTGAAGGAAGACGAAACGCTGAGATTCTTAAGGCCGAAGGAGACGCTCAAGCAACAATCTTAAAAGCTAATGCTGATAGTCAAGCTATTAAAAAAGTAGCTGAGTCTGCAGAAAATTACTTTACCGATAGGGCTCAAGCCTGGAGGCGTTTTGAAGTCTCATCAACGGTTTTGGAGAATAATACTAAGTATGTGATTCCATCATCTTCAGAGGTAGTTAATATCCTTAATCTTGATGGCGCCTCAAACGTCATCCCGCTTGATAAACATACAAAAAAATAA
PROTEIN sequence
Length: 295
MEITLVILVIGSVIALITLLMSVKIINQAEKGIVLRLGKFNRVVEAGLNLIIPYIDSLMKVDVRERVINVEPQKVITKDNVSVTVDAVIYYKVVDPVKAEFEVEDFDTAATTLAQTNLRNVVGDKTLDETLTARDVINTSLRNVLDEATHGWGVKVTRVEVQKIEPPPEISEAMSLQMRAEREKRAKILQAEGIRQSFILEAEGRRNAEILKAEGDAQATILKANADSQAIKKVAESAENYFTDRAQAWRRFEVSSTVLENNTKYVIPSSSEVVNILNLDGASNVIPLDKHTKK*