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ACD13_29

Alias: ACD13_11237.143636.20

Search features with annotation key words

Displaying items 91-120 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_29_91

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comp(67086..68894)
DNA (1809bp) protein (603aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
seg (db=Seg db_id=seg from=427 to=440)
seg (db=Seg db_id=seg from=261 to=273)
seg (db=Seg db_id=seg from=457 to=471)
ACD13_29_92
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

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comp(68913..69146)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=3 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKR62090.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_29_93
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(69156..69782)
DNA (627bp) protein (209aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
seg (db=Seg db_id=seg from=102 to=114)
Uncharacterized protein {ECO:0000313|EMBL:KKR58000.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_94
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(69796..70212)
DNA (417bp) protein (139aa)
hypothetical protein
Cell divisionFtsK/SpoIIIE (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS46_9BACT (db=UNIREF evalue=1.0e-23 bit_score=112.0 identity=46.21 coverage=91.3669064748201)
no description (db=HMMSmart db_id=SM00843 from=59 to=125 evalue=2.7e-29 interpro_id=IPR018541 interpro_description=DNA translocase ftsK gamma)
Ftsk_gamma (db=HMMPfam db_id=PF09397 from=61 to=124 evalue=1.5e-24 interpro_id=IPR018541 interpro_description=DNA translocase ftsK gamma)
ACD13_29_95

Not on your lists

70860..71414
DNA (555bp) protein (185aa)
70860..71414 + (rbs_motif=ATA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13436.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_96

Not on your lists

71715..71984
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=61 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=82)
Uncharacterized protein {ECO:0000313|EMBL:EKE13437.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_97
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(71985..73637)
DNA (1653bp) protein (551aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF34_BREBN (db=UNIREF evalue=3.0e-113 bit_score=412.0 identity=40.79 coverage=99.4555353901996)
seg (db=Seg db_id=seg from=438 to=453)
coiled-coil (db=Coil db_id=coil from=499 to=520 evalue=NA)
ACD13_29_98
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(73642..74283)
DNA (642bp) protein (214aa)
Phage SPO1 DNA polymerase-related protein
Phage SPO1 DNA polymerase-related protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS51_9BACT (db=UNIREF evalue=7.0e-39 bit_score=163.0 identity=49.71 coverage=80.3738317757009)
seg (db=Seg db_id=seg from=3 to=16)
seg (db=Seg db_id=seg from=109 to=116)
ACD13_29_99

Not on your lists

comp(74276..74752)
DNA (477bp) protein (159aa)
metallophosphoesterase; K07095 (db=KEGG evalue=4.0e-11 bit_score=70.1 identity=32.19 coverage=84.9056603773585)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=1 to=154 evalue=1.9e-24)
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=1 to=158 evalue=1.2e-16)
Metallophos (db=HMMPfam db_id=PF00149 from=1 to=119 evalue=1.6e-08 interpro_id=IPR004843 interpro_description=Metallophosphoesterase GO=Molecular Function: hydrolase activity (GO:0016787))
ACD13_29_100
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(74769..75815)
DNA (1047bp) protein (349aa)
hypothetical protein
seg (db=Seg db_id=seg from=236 to=248)
ATP DEPENDENT LON PROTEASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10046 from=2 to=346 evalue=4.2e-83)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=69 to=346 evalue=3.0e-34)
ACD13_29_101
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists


comp(75860..78223)
DNA (2364bp) protein (788aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIW5_9FIRM (db=UNIREF evalue=2.0e-151 bit_score=540.0 identity=48.74 coverage=84.1370558375635)
seg (db=Seg db_id=seg from=664 to=676)
ACD13_29_102

Not on your lists


comp(78232..78501)
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=39 to=69 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S15 (db=HMMPanther db_id=PTHR23321:SF10 from=4 to=88 evalue=8.4e-37 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR (db=HMMPanther db_id=PTHR23321 from=4 to=88 evalue=8.4e-37)
ACD13_29_103
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(78592..79509)
DNA (918bp) protein (306aa)
seg (db=Seg db_id=seg from=4 to=17)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=176 to=230 evalue=1.2e-06)
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:KKR57991.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_104
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(79502..80932)
DNA (1431bp) protein (477aa)
infB; translation initiation factor IF-2
seg (db=Seg db_id=seg from=368 to=383)
seg (db=Seg db_id=seg from=318 to=332)
TRANSLATION FACTOR (db=HMMPanther db_id=PTHR23115 from=2 to=309 evalue=1.0e-85)
ACD13_29_105
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(81054..82313)
DNA (1260bp) protein (420aa)
hypothetical protein
seg (db=Seg db_id=seg from=339 to=402)
seg (db=Seg db_id=seg from=74 to=91)
NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=7 to=337 evalue=2.3e-118 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: transcription regulator activity (GO:0030528))
ACD13_29_106
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(82411..83283)
DNA (873bp) protein (291aa)
molecular chaperone DnaJ
seg (db=Seg db_id=seg from=121 to=134)
seg (db=Seg db_id=seg from=72 to=97)
DNAJ_1 (db=PatternScan db_id=PS00636 from=49 to=68 evalue=0.0 interpro_id=IPR018253 interpro_description=Heat shock protein DnaJ, conserved site GO=Molecular Function: heat shock protein binding (GO:0031072))
ACD13_29_107

Not on your lists

comp(83294..85222)
DNA (1929bp) protein (643aa)
hypothetical protein
seg (db=Seg db_id=seg from=510 to=529)
seg (db=Seg db_id=seg from=628 to=642)
seg (db=Seg db_id=seg from=602 to=621)
ACD13_29_108
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(85232..85678)
DNA (447bp) protein (149aa)
Protein GrpE
coiled-coil (db=Coil db_id=coil from=15 to=43 evalue=NA)
GrpE (db=HMMPfam db_id=PF01025 from=4 to=145 evalue=2.0e-28 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
GRPE PROTEIN (db=HMMPanther db_id=PTHR21237 from=9 to=145 evalue=1.1e-17 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0
ACD13_29_109
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(85681..86433)
DNA (753bp) protein (251aa)
Heat-inducible transcription repressor hrcA
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=88 evalue=2.2e-26 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=90 evalue=5.0e-23)
GAF domain-like (db=superfamily db_id=SSF55781 from=74 to=250 evalue=2.1e-18)
ACD13_29_110

Not on your lists

comp(86489..88216)
DNA (1728bp) protein (576aa)
putative peptidoglycan lipid II flippase MurJ
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
transmembrane_regions (db=TMHMM db_id=tmhmm from=169 to=191)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
ACD13_29_111

Not on your lists


88363..88656
DNA (294bp) protein (98aa)
seg (db=Seg db_id=seg from=81 to=97)
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=5 to=76 evalue=2.1e-09 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=3 to=94 evalue=6.4e-09 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.20.58.110 from=5 to=77 evalue=5.1e-07 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_112
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

88732..89262
DNA (531bp) protein (177aa)
PilN (db=HMMPfam db_id=PF05137 from=7 to=158 evalue=6.9e-11 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
Uncharacterized protein {ECO:0000313|EMBL:KKR57023.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_113
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

89267..89926
DNA (660bp) protein (220aa)
coiled-coil (db=Coil db_id=coil from=57 to=85 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=50)
Uncharacterized protein {ECO:0000313|EMBL:KKR64124.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_29_114
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

89929..90249
DNA (321bp) protein (107aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=79 to=96)
seg (db=Seg db_id=seg from=10 to=24)
Uncharacterized protein {ECO:0000313|EMBL:KKR64125.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_29_115
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

90252..91607
DNA (1356bp) protein (452aa)
seg (db=Seg db_id=seg from=10 to=27)
seg (db=Seg db_id=seg from=373 to=417)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=423 to=445)
ACD13_29_116
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

91612..92733
DNA (1122bp) protein (374aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
seg (db=Seg db_id=seg from=289 to=300)
seg (db=Seg db_id=seg from=247 to=274)
seg (db=Seg db_id=seg from=93 to=104)
ACD13_29_117
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

92737..93714
DNA (978bp) protein (326aa)
Conserved domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KVN0_9GAMM (db=UNIREF evalue=6.0e-09 bit_score=65.5 identity=33.9 coverage=35.5828220858896)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=103 to=112)
seg (db=Seg db_id=seg from=252 to=293)
ACD13_29_118

Not on your lists

93722..94009
DNA (288bp) protein (96aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
Uncharacterized protein {ECO:0000313|EMBL:EKE13459.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_119

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comp(94011..96458)
DNA (2448bp) protein (816aa)
dolichyl-phosphate-mannose-protein mannosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=540 to=557)
transmembrane_regions (db=TMHMM db_id=tmhmm from=508 to=530)
transmembrane_regions (db=TMHMM db_id=tmhmm from=427 to=444)
ACD13_29_120

Not on your lists

96523..97608
DNA (1086bp) protein (362aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=336 to=353)
transmembrane_regions (db=TMHMM db_id=tmhmm from=306 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=283 to=302)
Displaying items 91-120 of 167 in total

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