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ACD13_29

Alias: ACD13_11237.143636.20

Search features with annotation key words

Displaying items 151-167 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_29_151
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

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127234..128280
DNA (1047bp) protein (349aa)
DNA-binding/iron metalloprotein/AP endonuclease
bact_gcp: putative glycoprotease GCP (db=HMMTigr db_id=TIGR03723 from=3 to=328 evalue=2.0e-116 interpro_id=IPR022450 interpro_description=Peptidase M22, O-sialoglycoprotein peptidase)
gcp_kae1: metallohydrolase, glycoprotease/Ka (db=HMMTigr db_id=TIGR00329 from=4 to=320 evalue=9.4e-106 interpro_id=IPR017861 interpro_description=Peptidase M22, glycoprotease, subgroup GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=22 to=320 evalue=1.1e-74 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD13_29_152

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128280..130367
DNA (2088bp) protein (696aa)
Valyl-tRNA synthetase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZP2_THERP (db=UNIREF evalue=0.0 bit_score=657.0 identity=44.58 coverage=98.2758620689655)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=52 to=63 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD13_29_153
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

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comp(130364..131272)
DNA (909bp) protein (303aa)
seg (db=Seg db_id=seg from=73 to=88)
seg (db=Seg db_id=seg from=103 to=119)
seg (db=Seg db_id=seg from=286 to=300)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
ACD13_29_154
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

131288..131554
DNA (267bp) protein (89aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKR57416.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_155
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

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comp(131564..132082)
DNA (519bp) protein (173aa)
ctc; 50S ribosomal protein L25/general stress protein Ctc
seg (db=Seg db_id=seg from=123 to=151)
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=1 to=128 evalue=2.9e-25 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.170.120.20 from=32 to=128 evalue=8.9e-13 interpro_id=IPR020057 interpro_description=Ribosomal protein L25, beta domain)
ACD13_29_156
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

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comp(132327..133679)
DNA (1353bp) protein (451aa)
GDP-mannose 4,6 dehydratase ISS
TPR repeat-containing protein alias=ACD13_11237.143636.20G0156,ACD13_11237.143636.20_156,ACD13_C00029G00156 id=6983 tax=ACD13 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR63227.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_29_157
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(135165..135587)
DNA (423bp) protein (141aa)
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=134 evalue=3.0e-25 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RnaseH (db=HMMPfam db_id=PF00075 from=4 to=134 evalue=1.4e-14 interpro_id=IPR002156 interpro_description=Ribonuclease H GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ribonuclease H activity (GO:0004523))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=2 to=136 evalue=2.7e-13)
ACD13_29_158

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comp(135679..136935)
DNA (1257bp) protein (419aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=212)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=252)
transmembrane_regions (db=TMHMM db_id=tmhmm from=262 to=284)
ACD13_29_159
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

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comp(136932..137393)
DNA (462bp) protein (154aa)
single-stranded nucleic acid binding R3H domain-containing protein
R3H (db=HMMPfam db_id=PF01424 from=111 to=152 evalue=2.0e-07 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
R3H domain (db=superfamily db_id=SSF82708 from=92 to=153 evalue=2.7e-06)
no description (db=HMMSmart db_id=SM00393 from=73 to=152 evalue=3.2e-06 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD13_29_160

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comp(137393..138214)
DNA (822bp) protein (274aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
seg (db=Seg db_id=seg from=30 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=222 to=244)
ACD13_29_161
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(138218..138442)
DNA (225bp) protein (75aa)
hypothetical protein
DUF37 (db=HMMPfam db_id=PF01809 from=1 to=72 evalue=3.7e-27 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Q4TQI6_9SPHN_Q4TQI6; (db=BlastProDom db_id=PD004225 from=23 to=72 evalue=1.0e-13 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=5 to=74 evalue=2.5e-12 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
ACD13_29_162
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists


comp(138439..138783)
DNA (345bp) protein (115aa)
ribonuclease P protein component
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=112 evalue=2.8e-21 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=3 to=110 evalue=4.5e-21 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=114 evalue=1.9e-16 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
ACD13_29_163

Not on your lists


comp(138795..138935)
DNA (141bp) protein (47aa)
seg (db=Seg db_id=seg from=33 to=44)
RIBOSOMAL_L34 (db=PatternScan db_id=PS00784 from=4 to=23 evalue=0.0 interpro_id=IPR020939 interpro_description=Ribosomal protein L34, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=3 to=46 evalue=7.6e-24 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=3 to=46 evalue=3.7e-22 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_164
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

139105..140466
DNA (1362bp) protein (454aa)
chromosomal replication initiator protein DnaA
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein dnaA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDB9_THET1 (db=UNIREF evalue=2.0e-90 bit_score=336.0 identity=40.6 coverage=99.5594713656388)
seg (db=Seg db_id=seg from=216 to=224)
ACD13_29_165
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

140672..141784
DNA (1113bp) protein (371aa)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
seg (db=Seg db_id=seg from=281 to=293)
no description (db=HMMSmart db_id=SM00480 from=17 to=366 evalue=1.6e-78 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=370 evalue=1.8e-73 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD13_29_166
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(141787..142350)
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=8 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKR63951.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_29_167
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(142365..143675)
DNA (1311bp) protein (437aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Displaying items 151-167 of 167 in total

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