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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_30

Organism: RIF_PHAGE_CU_29_17

RP 0 / 55 BSCG 2 / 51 ASCG 2 / 38
Location: 20163..20963

Top 3 Functional Annotations

Value Algorithm Source
ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_378 (Fragment) n=1 Tax=Haemonchus contortus RepID=U6PFT0_HAECO similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 174.0
  • Bit_score: 75
  • Evalue 6.30e-11
X-linked retinitis pigmentosa GTPase regulator {ECO:0000313|EMBL:KFP29506.1}; Flags: Fragment;; TaxID=57412 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius.;" source="Colius striatus (Speckled mousebird).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 261.0
  • Bit_score: 79
  • Evalue 8.00e-12
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 25.5
  • Coverage: 235.0
  • Bit_score: 57
  • Evalue 5.00e-06

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Taxonomy

Colius striatus → Colius → Coliiformes → Aves → Chordata → Metazoa

Sequences

DNA sequence
Length: 801
ATGGCAAAAATTAAAATCAAAAAATCAGATTTAGATAGAATTATCAAAGAAGAAACTACTAAATTCAAAAAAGCTATTATTCTTAAAAAAGAATTAGCTTCTATTAAAAAACAACTTAACCAACTTAATGAAGTTGAAGCCGGTGGAAGTGAAGAACCTACTGGAGGAAGCAATCTTACACCTGCAGAAACACAGTTTGTTAAAGATAAATTCCAACATAAACCAAAATTTCATAATCCATCAAAAAATCCTAATACGATGATGGAAGATGACGAAGAAATTGAAGATACTGAAATCGAAGATACTGATATGAATTTAGATACTGACGGTGACACAGAAATGGATATTGACACAGACGTTGATGATGATGGAAAAATAGATAAAGCTGCTGTACTTAGTGCAATTGAAGACCTTAAAATGGCTCTTAATTTATCCGGAGATGCTGGTGATGAAGGCTTAGAAGATGCTGGAAGCGTAGAAGATTTAGGTAGCGAAGAAGGTGTTGAAGAACCAGAAGAAGGAGAAATTGAAGGTTCAGAAGAAGCTGAAGTAACTGATAAAGAATCTGATGAAGAAAACACAGAAGATAATGAAGAAGGTGATGAATCTTTCGAATTTGAAGAAGAAGGTGTTCAAGAAAACCTTGAGGAGCCTATCGTTGGAAAAACTCCTGTTCAAAATGCTCAACAAGATAACGTTAATGATAACATGGAAAAAACCAACGACCCAAAGGCTGGTGGTACATTAATGGAATCAGAAAAGAAAAGAATGGCAGTACTTGCCGGAATCATAAAAGGTTAA
PROTEIN sequence
Length: 267
MAKIKIKKSDLDRIIKEETTKFKKAIILKKELASIKKQLNQLNEVEAGGSEEPTGGSNLTPAETQFVKDKFQHKPKFHNPSKNPNTMMEDDEEIEDTEIEDTDMNLDTDGDTEMDIDTDVDDDGKIDKAAVLSAIEDLKMALNLSGDAGDEGLEDAGSVEDLGSEEGVEEPEEGEIEGSEEAEVTDKESDEENTEDNEEGDESFEFEEEGVQENLEEPIVGKTPVQNAQQDNVNDNMEKTNDPKAGGTLMESEKKRMAVLAGIIKG*