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cn_combo_scaffold_90

Alias: ACIDO32_5

Search features with annotation key words

Displaying items 61-90 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_90_61
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

75979..76803
DNA (825bp) protein (275aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] id=12554346 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
coenzyme A transferase
Coenzyme A transferase {ECO:0000313|EMBL:ACZ38042.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source
cn_combo_scaffold_90_62
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

76800..77606
DNA (807bp) protein (269aa)
coenzyme A transferase; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] id=12554347 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
coenzyme A transferase
Coenzyme A transferase {ECO:0000313|EMBL:ABJ81260.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus
cn_combo_scaffold_90_63
bacterium YEK0313, Bacteria

Not on your lists

77727..78431
DNA (705bp) protein (235aa)
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] id=12554348 bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:CEJ11517.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
protocatechuate 3,4-dioxygenase, beta subunit
cn_combo_scaffold_90_64
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

78428..79006
DNA (579bp) protein (193aa)
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] id=12554349 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:ABJ81258.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sou
cn_combo_scaffold_90_65
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

79066..80418
DNA (1353bp) protein (451aa)
3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2); K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] id=12554350 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ABJ81257.1}; EC=5.5.1.2 {ECO:0000313|EMBL:ABJ81257.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibac
cn_combo_scaffold_90_66
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

80420..81592
DNA (1173bp) protein (391aa)
4-carboxymuconolactone decarboxylase (EC:3.1.1.24 4.1.1.44); K14727 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] id=12554351 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4-carboxymuconolactone decarboxylase (EC:3.1.1.24 4.1.1.44) rbh
4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase {ECO:0000313|EMBL:ABJ81256.1}; EC=3.1.1.24 {ECO:0000313|EMBL:ABJ81256.1};; EC=4.1.1.44 {ECO:0000313|EMBL:ABJ81256.1};; TaxID=234267 s
cn_combo_scaffold_90_67
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

81674..82894
DNA (1221bp) protein (407aa)
aldose 1-epimerase id=12554352 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aldose 1-epimerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
aldose 1-epimerase
cn_combo_scaffold_90_68
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82914..83090
DNA (177bp) protein (59aa)
hypothetical protein id=12554353 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41196.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
cn_combo_scaffold_90_69
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

83087..83581
DNA (495bp) protein (165aa)
hypothetical protein id=12554354 bin=CNBR_ACIDO species=Leptospira sp. B5-022 genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
hypothetical protein
cn_combo_scaffold_90_70
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

83657..86302
DNA (2646bp) protein (882aa)
hypothetical protein id=12554355 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84958.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
cn_combo_scaffold_90_71
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

86391..86534
DNA (144bp) protein (48aa)
id=12554356 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554356 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_90_72
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86524..87267)
DNA (744bp) protein (248aa)
hypothetical protein id=12554357 bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJ17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73864.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
cn_combo_scaffold_90_73
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(87319..88236)
DNA (918bp) protein (306aa)
hypothetical protein; K07071 id=12554358 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein; K07071 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
cn_combo_scaffold_90_74
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(88331..88987)
DNA (657bp) protein (219aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] id=12554359 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RIFCSPLOWO2_12_FULL_A
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
cn_combo_scaffold_90_75
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(89019..89780)
DNA (762bp) protein (254aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] id=12554360 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisF; imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
imidazole glycerol phosphate synthase subunit HisF
cn_combo_scaffold_90_76
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(89782..90390)
DNA (609bp) protein (203aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=12554361 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
imidazole glycerol phosphate synthase subunit HisH
cn_combo_scaffold_90_77
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(90387..90977)
DNA (591bp) protein (197aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=12554362 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
cn_combo_scaffold_90_78
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(91021..92268)
DNA (1248bp) protein (416aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
histidinol dehydrogenase id=12554363 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidinol dehydrogenase
cn_combo_scaffold_90_79
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(92268..93155)
DNA (888bp) protein (296aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] id=12554364 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
cn_combo_scaffold_90_80
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(93152..93478)
DNA (327bp) protein (109aa)
phosphoribosyl-AMP cyclohydrolase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] id=12554365 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosyl-AMP cyclohydrolase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phosphoribosyl-AMP cyclohydrolase
cn_combo_scaffold_90_81
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93900..95006
DNA (1107bp) protein (369aa)
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12554366 bin=CNBR_ACIDO species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Ribulose-1,5-bisphosphate carboxylase {ECO:0000313|EMBL:EJW11947.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod
RuBisCO-like protein
Type IV Deep ykr. Not for carbon fixation. Rose Kantor (4/23/14)
cn_combo_scaffold_90_82
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

95009..95467
DNA (459bp) protein (153aa)
cupin id=12554367 bin=CNBR_ACIDO species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADH62264.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvan
cn_combo_scaffold_90_83
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

95464..96396
DNA (933bp) protein (311aa)
putative 2,6-dihydroxypseudooxynicotine hydrolase id=12554368 bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative 2,6-dihydroxypseudooxynicotine hydrolase Tax=GWF2_Lentisphaerae_50_93_curated
putative 2,6-dihydroxypseudooxynicotine hydrolase
cn_combo_scaffold_90_84
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(96437..97348)
DNA (912bp) protein (304aa)
hypothetical protein id=12554369 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74186.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
cn_combo_scaffold_90_85
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(97350..97580)
DNA (231bp) protein (77aa)
hypothetical protein id=12554370 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49174.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
cn_combo_scaffold_90_86
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(97591..98406)
DNA (816bp) protein (272aa)
hypothetical protein id=12554371 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
cn_combo_scaffold_90_87
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(98403..98696)
DNA (294bp) protein (98aa)
hypothetical protein id=12554372 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68745.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
cn_combo_scaffold_90_88
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(98696..99952)
DNA (1257bp) protein (419aa)
hypothetical protein id=12554373 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
cn_combo_scaffold_90_89
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100130..101119)
DNA (990bp) protein (330aa)
sigma-54 dependent transcriptional regulator id=12554374 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-54 dependent transcriptional regulator rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAN97032.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;"
cn_combo_scaffold_90_90
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101215..101901
DNA (687bp) protein (229aa)
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling id=12554375 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
Displaying items 61-90 of 162 in total

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