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cn_combo_scaffold_90_81

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 93900..95006

Top 3 Functional Annotations

Value Algorithm Source
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12554366 bin=CNBR_ACIDO species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 725
  • Evalue 2.10e-206
Ribulose-1,5-bisphosphate carboxylase {ECO:0000313|EMBL:EJW11947.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 366.0
  • Bit_score: 455
  • Evalue 7.50e-125
RuBisCO-like protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 365.0
  • Bit_score: 413
  • Evalue 5.00e-113

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Notes

Type IV Deep ykr. Not for carbon fixation. Rose Kantor (4/23/14)

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
GTGGCATCACGACTGACGGTCGTCTATCGCGTGCGCGGCAGCGCAGCGTCGGCGGCCGAGCGCGCCGAGGCGCTGGCCGTCGAGCAGAGCGTGGAGATGCCCGTCTCGGCGATCGCCGACGCATACGTGCGTGAACAGATCGTCGGCCGTGTCCTGGGGATCGACCAGGTCGACGACGAGGTGCACGATGTGCGCATCGGCCTGGCGCCCGAGACGATCGGAGACGACGCGGGACAGCTCTTCAACATGCTGTTCGGCAACAGTTCGCTGCTCGATGACGTCGTGCTGCAGGACGTCGATCTGCCCGACGATCTGGTGCGGGCGTTCGGCGGACCGCGCCACGGCATCGACGGATTGCGTCGTCGCATCGGCGGCCGGCGGCGGGCCCTGACCGGATCGGCACTGAAGCCCCAGGGGCTCCCGCCGGACGATCTGGCGCGGCTGGCCGCGCGATTCGCGCAGGGCGGCATCGACGTGGTGAAGGACGATCACGGCCTGGCGGACCAGGCCTACTCGCCGTTCGCCGCGCGAATCACGGCCGTTGCCGCAGCGCTGCGGGACGTGGCCGATCGGACGGGGCACCGCACGTGCTACGTCCCCAGCGTCTCCGGCGATCTCGACCGTTGCAGCCGCCAGATCGATCTGGCGCGCGGCGAAGGACTCGACACGGTGATGGTGGCGCCGATGATTGCCGGCCCCGCGAACGTACAGGCCCTGGTGCGCCGCTACCCGGACATCGCGTTCATCGCGCATCCAACGCTGGCCGGCGCGGCGCGTCTCGCCCCGCTGGTGCTCTACGGCCGGCTCTTCCGCCTGATCGGCATCGACGGCGTGATCTTCCCGAATCACGGCGGGCGATTCGGCTATTCGGCCGACACGTGCCGCGCGCTTGCCGACGCGGCCCGAGGGCCATGGCGCGATCTGGCTCCGGTACTCCCGATTCCCGCCGGTGGGATGACGCCGGATCGCGCCGGTGAGATGCTCGACTTCTACGGCCGCGACGTGCTGCTGCTGATTGGCGGCGCGCTGCTCAGGGCCGGCGATCGACTGATCGACGCAACGGCGGCGTTCGTGCGGGCCGTCGACGCGCACACCTACGGAGACTGA
PROTEIN sequence
Length: 369
VASRLTVVYRVRGSAASAAERAEALAVEQSVEMPVSAIADAYVREQIVGRVLGIDQVDDEVHDVRIGLAPETIGDDAGQLFNMLFGNSSLLDDVVLQDVDLPDDLVRAFGGPRHGIDGLRRRIGGRRRALTGSALKPQGLPPDDLARLAARFAQGGIDVVKDDHGLADQAYSPFAARITAVAAALRDVADRTGHRTCYVPSVSGDLDRCSRQIDLARGEGLDTVMVAPMIAGPANVQALVRRYPDIAFIAHPTLAGAARLAPLVLYGRLFRLIGIDGVIFPNHGGRFGYSADTCRALADAARGPWRDLAPVLPIPAGGMTPDRAGEMLDFYGRDVLLLIGGALLRAGDRLIDATAAFVRAVDAHTYGD*