ggKbase home page

cn_combo_scaffold_166_1

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 66..329

Top 3 Functional Annotations

Value Algorithm Source
tnpA; IS3/IS407-type transposase; K07497 putative transposase id=12556823 bin=CNBR_ACIDO species=Perlucidibaca piscinae genus=Perlucidibaca taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 3.30e-41
transposase similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 87.0
  • Bit_score: 153
  • Evalue 2.90e-35
Transposase {ECO:0000313|EMBL:AIU26153.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 87.0
  • Bit_score: 153
  • Evalue 1.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGAAGAAGCGGTTCACGGAAGCACAGATTGTCGGGTTCCTGCGGGAGGCCGATGCCGGGGTGGCGGTGAAGGACCTGTGCCGGAAGCACGGGTTCTCGGCGGGCAGCTACTACCTGTGGCGGAGCAAGTTCGGTGGCATGAGCGTGTCGGATGCCAAGCGCCTGAAGGAGCTGGAACTGGAGAACGCCCGGCTGAAGAAGCTCTTGGCCGACTCGCTGCTCGAGAACGAGGTGACCCGCGAGGCCCTCCGCCGAAAATGGTGA
PROTEIN sequence
Length: 88
MKKRFTEAQIVGFLREADAGVAVKDLCRKHGFSAGSYYLWRSKFGGMSVSDAKRLKELELENARLKKLLADSLLENEVTREALRRKW*