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cn_combo_scaffold_1119_25

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 27680..28534

Top 3 Functional Annotations

Value Algorithm Source
glnR; GlnR family transcriptional regulator id=12557780 bin=CNBR_ACIDO species=Bifidobacterium magnum genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 557
  • Evalue 5.90e-156
putative phosphate regulon transcriptional regulatory protein PhoB; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_Acidobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 238.0
  • Bit_score: 110
  • Evalue 3.50e-21
response regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 181.0
  • Bit_score: 98
  • Evalue 2.80e-18

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Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGCACGCTCCGACCGAGTGGTTCTGCGCCTTGCTCGATACGGCACCCGACGTCTATTTCCGTTACGCTCTCGAGCCGGAGCGGCGGCTCGCCTACGTCAGTCCCTCCGTCGCGAGTCTCACCGGGCATCCACCGGAGGCGTTCTACGCCGACCGTCAGCTCTGCTTCGCCGTCGTCGCCGGGGCGGACCGGCGCCTGCTCCGGCACCTGCTGCGCTCGCGACGCGAACTCGTCACCACGGTGCACCTGGTGCGCGACGGCGTCTCGCTGCCCGTCGAATTGCACACCGTGGCACTCGTGCGGCGCCGGAGGCTCGTGGCAATCGAGGGCGTGGCGCGTCTGGCGACGGGGGCGCCAACGCGGCTTCCCGCAGGCGGGGTCGCGACCGGCGACCAGCCCACGCAGCAGCGGCTGGCCGCGCTGCTCGTCGAGGTCCACGATCTGCTGCACCGGGTGGTTGCGGATCGTCGAACGGACACGGGCGATGGCGTCGCGGACGGACAGCACAGCGTCTCGGCACTCGAAACATCGAGTGCGGGCATCCTGCGTCTCGGCGACCTCGTCGTCGATCTCGCGCGGTTCGTCGTCACGGAGTCGGGCGTGGCCGTGTCGCTGACGCCGCTCGAGCTCAAGGCGCTGGCCTATCTCCTCGAGCGCCCGGGACGCATCGTCACGCGCGCGCGGATGCTCCAGGACGTGTGGGGCTATCGGTATACGGGCGACGACCGCACGGTCGACGTCCACGTCTCGCGCCTGCGCCGCAAGCTGCCGTCGCTGCGCGGCCGGCTCGTGGCTCTGCGCAACATCGGTTACCGGCTCGATCGCGACGAGCCGGTGCACGCGACAGGCGCGTAG
PROTEIN sequence
Length: 285
MHAPTEWFCALLDTAPDVYFRYALEPERRLAYVSPSVASLTGHPPEAFYADRQLCFAVVAGADRRLLRHLLRSRRELVTTVHLVRDGVSLPVELHTVALVRRRRLVAIEGVARLATGAPTRLPAGGVATGDQPTQQRLAALLVEVHDLLHRVVADRRTDTGDGVADGQHSVSALETSSAGILRLGDLVVDLARFVVTESGVAVSLTPLELKALAYLLERPGRIVTRARMLQDVWGYRYTGDDRTVDVHVSRLRRKLPSLRGRLVALRNIGYRLDRDEPVHATGA*