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cn_combo_scaffold_1426_11

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 12795..14198

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT id=12556811 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 468.0
  • Bit_score: 897
  • Evalue 5.10e-258
RND efflux system, outer membrane lipoprotein, NodT Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 457.0
  • Bit_score: 500
  • Evalue 2.00e-138
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 461.0
  • Bit_score: 454
  • Evalue 4.20e-125

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Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGATGCGCCGTGGATACCCGCTCGCCGTGGCGGTCGCCCTGCTGACGACGTCGGCGTGCGCAACCGTCGGTCCCGACTACACACGCCCCGACGTAACGCCGCCCGCCATGTTTCGCGGCGCCGAGGCCGCGCCTGACGCCACGGCCCCCGCCCTGGCCGAGACGCACTGGGCCACCGTGTTCGTCGACGAGCCCTTGCAGGAGCTGATCGGGACCGCACTGCGCGAGAACTACGACGTGCGCATCGCGGCCGCGCGCATCGCCCAGGCCGAGGCCACCTTCGGCGTGACGCGATCGAACCAGTTCCCCACGGTCGACGCGCAGGCCGTGGGCCAGGGCCAGCGCTCGTCGCTGCAGTCGAGCACGGGCGACGCGCGCACGGCGGGCGTCATCCAGCTTGGCGGGACGGCCAGCTGGGATCTGGACTTCTGGGGTCGCTACCGGCGTGCGACCGAGTCGGCCCGCGCCCAGCTGATCGCGACCGAGTGGGGACGCCACGCGGTGGCGGCGAGCCTCGTCAGTCGCGTGGCGTCGGCGTACTACACGCTGCGCGCGCTCGACCTGGAACGCGAGATCGCGCAGCGCACGATCGAGACGCGCCAGGAGTCGCTGCGCCTGACGCAGGTGCGCGAGCGCGGCGGCGCCACGTCGCTCGTCGACGTCCGGCAGGCCGAGCAGCTCGTGCTCGGCGCGCGTGCGCGTCTCGTCGACCTCGATCGGCTGACGGCGCAGCAGGAGAACCTGTTGAGCGTGCTCGTGGGCCGCGATCCCGGCCCCGTCGCGCGGGGCCGCGCGCTGACCGATCAGCCGCACGCGCCCGTGGTGCCGGCCGGGCTGCCGTCCGACCTGATCGAGCGCCGGCCCGACGTGCGGATCGCCGAGCAGCAGATCATCGCGGCCAATGCCGGGATCGGCGTGGCGAAAGCAGCGTACTTTCCGCGGATCGCGCTGACCGGGTCGGGCGGCGTGGCCAGCACCGCGCTGTCGGCGCTGTTCACTGGCGCGGCGGGCGCCTGGACGGCGGCGGCCTCGGCCGTCCAGCCGGTCTTCAACGCGGGCCGGACGCGATCGCAGGTGGCGCTGGCCGAAGCGAGACGGGAGGAAGCCGAGCTCGCCTATCGCCAGACCGTGCAGCAGGCGTTCCGCGAGGTGTCCGACGCGCTCGTCGGGTATCAGCAGACGCAGGAGCTGCGCGCGGTGCAGGAATCGCTCGTGGACGCCGCGCGCGACGCCAGGCGGCTGGCCGATCTGCGCTATCAGGGCGGCGCCAGCAGCTACCTCGACGTGCTCGACAGCGATACGCGGCTGTTCGACGCCGAGCTGGGGCTGGTGCGCGCGCGCCTCGGCGAACTGACGACGTTCGTCGAAATCTATCGCGCGCTCGGCGGCGGCTGGCAGGACTAG
PROTEIN sequence
Length: 468
MMRRGYPLAVAVALLTTSACATVGPDYTRPDVTPPAMFRGAEAAPDATAPALAETHWATVFVDEPLQELIGTALRENYDVRIAAARIAQAEATFGVTRSNQFPTVDAQAVGQGQRSSLQSSTGDARTAGVIQLGGTASWDLDFWGRYRRATESARAQLIATEWGRHAVAASLVSRVASAYYTLRALDLEREIAQRTIETRQESLRLTQVRERGGATSLVDVRQAEQLVLGARARLVDLDRLTAQQENLLSVLVGRDPGPVARGRALTDQPHAPVVPAGLPSDLIERRPDVRIAEQQIIAANAGIGVAKAAYFPRIALTGSGGVASTALSALFTGAAGAWTAAASAVQPVFNAGRTRSQVALAEARREEAELAYRQTVQQAFREVSDALVGYQQTQELRAVQESLVDAARDARRLADLRYQGGASSYLDVLDSDTRLFDAELGLVRARLGELTTFVEIYRALGGGWQD*