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cn_combo_scaffold_1426_25

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(30616..31299)

Top 3 Functional Annotations

Value Algorithm Source
OmpR family two-component response regulator id=12556797 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 1.10e-123
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_02_FULL_Acidobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 222.0
  • Bit_score: 277
  • Evalue 1.70e-71
Two-component transcriptional regulator, CheY-like receiver domain similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 221.0
  • Bit_score: 224
  • Evalue 2.70e-56

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGGGTGCTGCTTGTTGAGGACGATCCGGAGATCAGCGGCTTCATCGTCCGCGGCCTGACCGAGGAGCGTCATCTCGTCGATCTGGTGACCGACGGGAACGCGGCCGTCGAGATGGCGGGCGCCGAGGAATACGACGCGGTCGTGCTCGACGTGATGCTGCCTGGTGCGGACGGGTTTGCCGCGTGCCGGGCGATGCGCGACCGCGGCCTCGATGTGCCGGTGATCATGGTGACGGCCCGTGACGCGGTCGCGGACCGCATCACGGGGCTCGACGAGGGCGCCGACGACTACCTTGTCAAGCCGTTCGCGTTCGAGGAACTGCTCGCACGGCTGCGCGCGCTCTCGCGACGCGGCCGGACGCGCCACCTGACCCATCGACTCGAGTACGGGCCCATCGCCATCGATCAGCGCGCCCACACGGCCACGGTCGCCGGCGTGCCGATCGTGCTGACGGCCACGGAATACCGGCTGCTCGAGTTCCTCGTCCGGCGCGCCGGGGCGATCGTGACGCGCGATCAGCTGGCGCAGCACGTGTGGGGCGGCGATTACGATCCGACGTCGAACAACGCGGACGTGTACGTCGGCTACGTGCGACGCAAGCTGCAGGCGCATGTCTCGGCCCCGCTCATCCACACGGTCCGCGGCCTCGGCTACATGCTGCGGCTGGAACCGCACGCATGA
PROTEIN sequence
Length: 228
MRVLLVEDDPEISGFIVRGLTEERHLVDLVTDGNAAVEMAGAEEYDAVVLDVMLPGADGFAACRAMRDRGLDVPVIMVTARDAVADRITGLDEGADDYLVKPFAFEELLARLRALSRRGRTRHLTHRLEYGPIAIDQRAHTATVAGVPIVLTATEYRLLEFLVRRAGAIVTRDQLAQHVWGGDYDPTSNNADVYVGYVRRKLQAHVSAPLIHTVRGLGYMLRLEPHA*