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cn_combo_scaffold_1686_22

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(21509..21856)

Top 3 Functional Annotations

Value Algorithm Source
HU family DNA-binding protein id=12556136 bin=CNBR_ACIDO species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 222
  • Evalue 3.10e-55
HU family DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 118.0
  • Bit_score: 113
  • Evalue 5.70e-23
DNA-binding protein HU family {ECO:0000313|EMBL:ACE85027.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 118.0
  • Bit_score: 113
  • Evalue 2.80e-22

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Taxonomy

Cellvibrio japonicus → Cellvibrio → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGCAAAGACCGCTAAGAAGAAACCGTTCAAGGCCACCCCGGCGTCGTCGCGTCGCTCCAAGGGCGATCTCGTCAAGGAGATTGCGGCGGCGACCGAGCTGAAGACGACCAAGGTCAAGGAAGTCTTCGATGTGCTGACCGCGATCATCGCGGCCGACCTCGGCAAGAAGGGCTCGGGCGAATTCAACTTCAACGGCCTGATGAAGCTGAAGACGGTCAACAAGCCCGCCACGAAGTCGCGCAAGGGCCGCAACCCGTTCACGGGCGAGGAGATCACGATCAAGGCCAAGCCGGCCAGCCGCAAGGTGCGCGTGCGTGCCCTGCGCTCGCTGAACGGCCTGATCTAG
PROTEIN sequence
Length: 116
MAKTAKKKPFKATPASSRRSKGDLVKEIAAATELKTTKVKEVFDVLTAIIAADLGKKGSGEFNFNGLMKLKTVNKPATKSRKGRNPFTGEEITIKAKPASRKVRVRALRSLNGLI*