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BSR_Lac_LFCR_na_at_30540_4

Organism: BSR_Lac_LFCR_na_at_Clostridiales_36_8

near complete RP 45 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2266..2988)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:921 RepID=R5KXC1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 236.0
  • Bit_score: 260
  • Evalue 1.60e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 236.0
  • Bit_score: 260
  • Evalue 2.30e-66
sigE; RNA polymerase sigma-E factor SigE similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 234.0
  • Bit_score: 255
  • Evalue 1.50e-65

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Taxonomy

Clostridium sp. CAG:921 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 723
ATGTATGTGCAAGTGAGTAAATTAAGAATAAAAATAATTTTAAAAATATCGCAGATATTATACATATTCAGAAAAGGAGTTTATTTTATAACCGGCACGGAAGTGCTGCCGCCCCCAATGGACTCAGAAGAGGAAGTGCGGGCTATAGACGGACTCAGGCACAAAGAAAACTGGGCGAAAAAAGAACTGATAGAGAGGAACTTAAGACTTGTTGTATATATTGCTAAAAAGTTTGAAAATACGAATGCTAACATTGAAGACATGGTATCGCTCGGGAGCATCGGGCTTATCAAAGCGGTAAACACGTTTGATGTGGATAAGAATATAAAATTCGCGACATACGCATCAAAATGCATAGAAAATGAAATGCTAATGCATCTGCGGAAATATACAAAGATAAAAAATGAGCTTTCGCTGGATGAACCGCTTAATACGGACAGCGAGGGAAACGAGCTGCTGCTTTGCGACATACTCGATTCGGGCGAGGACAGCGTGTTTTTGACTATTGAGAAAAACTCCGACAGCGAGATACTGTGGGAGCTTATAGGAAAATTAAACGAGCGCGACCAGGATATTTTAAAAAAGAGATTCGGACTGTGCAACATCTGCGAGATGACACAGAAAGAGATAGCGGACGAGATGAATATTTCGCAGTCATACATATCCCGCCTTGAAAAAAAACTTATAAATCAGTTAAAAAAAGATATGTGCAAATTAATTTAA
PROTEIN sequence
Length: 241
MYVQVSKLRIKIILKISQILYIFRKGVYFITGTEVLPPPMDSEEEVRAIDGLRHKENWAKKELIERNLRLVVYIAKKFENTNANIEDMVSLGSIGLIKAVNTFDVDKNIKFATYASKCIENEMLMHLRKYTKIKNELSLDEPLNTDSEGNELLLCDILDSGEDSVFLTIEKNSDSEILWELIGKLNERDQDILKKRFGLCNICEMTQKEIADEMNISQSYISRLEKKLINQLKKDMCKLI*