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BSR_Lac_UAPBR_inlet_at_116457_7

Organism: BSR_Lac_UAPBR_inlet_at_Clostridiales_61_7

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 4
Location: comp(2901..3422)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRM4_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 163.0
  • Bit_score: 174
  • Evalue 8.50e-41
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 163.0
  • Bit_score: 174
  • Evalue 2.40e-41
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 163.0
  • Bit_score: 174
  • Evalue 1.20e-40

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Taxonomy

Clostridium saccharobutylicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 522
GTGAGGGGCATCGGAAGCGGGCAGAAATTCGAAGCTTATGTAAACCAATACGGCAGGCTGGTGCTCAGCATCTGCTACTCCATGACCGGCGACTACTTCGCCGCCGAGGACCTGGCCCAGGAGACGCTGCTATCCGCCTACAAGGGCATGGACCGCTTCGACGGGGGCAACCCCAAGGGGTGGCTGTGCACCATCGCCGCCAACAAGTGCCGAGACTATCTCAAAAGCGCGGCCCGCAGAACCGCACCCGTGGACGACGAAGCATTGTCGGCCGCGGCGGGGTCGGAGCCCTCGGGAGAGGACCGGTACATAGCCCGGGAAACCGAGGAGCGGCTGCGGCTATTGTGCGGGAGGCTCAAGGAGCCTTACCGGGACGCCGCTCTCTCCTATTTCTGCGAGGGCATCCCCCCGGACACGCTGGCAAAGCAGACCGGCGAGAATCCAAACACCCTTCGCACCCGGGTATACAGAGCCCGGGAGATGTTAAAGAAGCTATGGAAGGAGGAGTACCGCGATGGATAG
PROTEIN sequence
Length: 174
VRGIGSGQKFEAYVNQYGRLVLSICYSMTGDYFAAEDLAQETLLSAYKGMDRFDGGNPKGWLCTIAANKCRDYLKSAARRTAPVDDEALSAAAGSEPSGEDRYIARETEERLRLLCGRLKEPYRDAALSYFCEGIPPDTLAKQTGENPNTLRTRVYRAREMLKKLWKEEYRDG*