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LAC_acetylene_scaffold_3585_16

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 16474..17253

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UKT6_SPIAZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 336
  • Evalue 1.90e-89
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 253.0
  • Bit_score: 338
  • Evalue 7.10e-90
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 336
  • Evalue 5.50e-90

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Taxonomy

Spirochaeta sp. JC230 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGGACTATGCATCATTAGAAGAAAATCGATTGTGGGAACTCTACCGCCGCACTGCAGACATCCATATCCGTGATGAACTCGTCCTGCGGTACTGTCCGCTCGTAAAATATGTAGCCGGGAAAGTCTCGGTCACTCTGCCATCGATGGTCGAATATCGCGACCTTGTTGGCTACGGGAATTTCGGGTTGCTCGACGCGATCGAAAAATTCGACCCGAAAAAGCACGTCAAATTCAAGACCTATGCGGTGACGCGCATCCGCGGAGCGATTTACGATCATCTGCGCGAGCTGGATTGGGTGCCTCGCTCAGTGCGCCGGAAAACAAAGCAAATCGAGCGCGCAATCGCAAAGCTCGAAAGCCACCTCGGCCGCCCCGCGACCGATGAGGAAATCGCGGCGGAAATGGGCATTGAACGAAAGGAGCTCATGAAAATAATGGCCAAAGTGGCTTCCTCTTCGATACTTTCGCTGCAGGAAATCTGGCCGATGGGCGCAGAGTCCGAAGGCGGAACGATAGGAGACACGCTTGAGTCGCTGCACAGCGCCAATCCGGATGTCACGCTTGAACGCGAGGAAATCCGGCGTGTCATCGTTGAAGCTATCCAGGAATTGCCCGACAAAGAAAAGAAAGTGCTTGTCCTGTATTATTATGAAAATCTCACGCTGAGAGAAATAGGCAGGATCCTCGAAGTGACTGAATCCCGAGTAAGCCAGCTGCATACCAAAGCGATTTTGCGGCTTCGCGCGAAACTGTCGAATCGCCGCAAGGGCATTCTATAG
PROTEIN sequence
Length: 260
MDYASLEENRLWELYRRTADIHIRDELVLRYCPLVKYVAGKVSVTLPSMVEYRDLVGYGNFGLLDAIEKFDPKKHVKFKTYAVTRIRGAIYDHLRELDWVPRSVRRKTKQIERAIAKLESHLGRPATDEEIAAEMGIERKELMKIMAKVASSSILSLQEIWPMGAESEGGTIGDTLESLHSANPDVTLEREEIRRVIVEAIQELPDKEKKVLVLYYYENLTLREIGRILEVTESRVSQLHTKAILRLRAKLSNRRKGIL*