ggKbase home page

SCN18_25_1_16_R1_B_scaffold_5996

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_5996_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..140
DNA (138bp) protein (46aa)
SCN18_25_1_16_R1_B_scaffold_5996_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176..1078
DNA (903bp) protein (301aa)
tyrosine recombinase XerD n=1 Tax=Pusillimonas noertemannii RepID=UPI000367471F
tyrosine recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_5996_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1199..1492
DNA (294bp) protein (98aa)
toxin n=1 Tax=Marinobacter lipolyticus RepID=UPI00036B4B75
Toxin {ECO:0000313|EMBL:KJD20119.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;"
higB; RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system
SCN18_25_1_16_R1_B_scaffold_5996_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1504..1842
DNA (339bp) protein (113aa)
Toxin-antitoxin stability system antidote protein n=2 Tax=Idiomarina loihiensis RepID=Q5QVA1_IDILO
XRE family transcriptional regulator {ECO:0000313|EMBL:KJD20118.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;"
toxin-antitoxin stability system antidote protein
SCN18_25_1_16_R1_B_scaffold_5996_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1874..2365
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
membrane protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E6655E
Transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_5996_trna_1
unknown

Not on your lists

comp(2374..2445)
DNA (72bp)
transferRNA Arg
Displaying 6 items

View Taxonomy