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SCN18_25_1_16_R1_B_scaffold_1902_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1634..3037)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 467.0
  • Bit_score: 927
  • Evalue 1.00e-267
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 467.0
  • Bit_score: 927
  • Evalue 5.00e-267
3-isopropylmalate dehydratase large subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU42_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 467.0
  • Bit_score: 822
  • Evalue 1.60e-235

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGCCCCAAACCCTGTACGACAAACTCTGGGACGCCCATGTGGTGCACCAGGGCCCGGACGGCACCTGTCTGCTGTACATCGACCGCCATCTCGTCCACGAGGTCACCAGCCCGCAGGCCTTCGAAGGCCTGGAACTGGCCGGCCGCAAGCCGTGGCGGATCTCCGCCAACCTGGCAGTGGCCGACCACAACGTGCCCACCACGGCGCGCAGCGAAGGCATCCAGGACCCGGTCTCGCGCCTGCAGGTCGACACCCTGGACAAGAACTGCGACACCTGGGGCATCACCGAATTCCGCATGAACGACCGCCGCCAGGGCATCGTCCACGTCATCGGGCCGGAACAGGGCGCCACTCTGCCGGGCATGACCGTGGTCTGCGGCGATTCGCACACCAGCACGCACGGCGCCATGGGGGCGCTGGCCTTCGGCATCGGCACCTCCGAAGTCGAGCACGTCCTGGCCACGCAGACGCTGCTGATGAAAAAGAGCCGCAGCATGCTGGTGCGCGTGGAAGGCGAACTGCCCTTCGGCTGTACGGCCAAGGACCTGATCCTGTACGTGATCGGGCGCATCGGCACGGCGGGCGGCACGGGCTACGCCATCGAGTTCGGCGGCAGCGCCGTGCGCGCCCTGTCCATGGAAGGCCGCATGACGGTCTGCAACATGGCGATCGAGGCCGGCGCGCGCTCGGGCATGGTGGCCGTGGACCAGACCACCATCGACTATTTCAAGGGCCGCCCCTACGCGCCCGAGGGCGCCCTGTGGGACCAGGCCGTGGAATACTGGCGCACCCTGCATTCCGATCCGGACGCGGCCTTCGACCGCGTGGTGGAGATCGACGCGGCCGACATCGAGCCGCAGGTCAGCTGGGGCACTTCGCCGGAAATGGTGGCCGCCGTCGGCGCGCGCGTGCCGGATCCGGCCGCCGAGACCGACGCCGTGCGCCGCAAGGGCATGGAGCGCGCCCTGCAGTACATGGACCTGAAGGCGGGCACGCCGCTGGCCGAAGTCGCCATCGACAAGGTCTTCATCGGCTCCTGCACCAACGCCCGCATCGAGGACCTGCGCGCGGCCGCCGCCGTGGCCAGGGGCCGCCGGGTGGCGCCCAACGTGCGCCTGGCGATGGTCGTGCCGGGCTCCGGCCTGGTCAAGGCCCAGGCCGAGCGCGAAGGGCTGGACCGCATCTTCCTGGACGCCGGCTTCGAATGGCGCGAGCCGGGCTGTTCGATGTGCCTGGCCATGAACGCCGACCGGCTGGAGCCGGGCGAGCGCTGCGCCTCGACCTCGAACCGCAACTTCGAGGGCCGCCAGGGGCAGGGCGGCCGCACCCACCTGGTCAGTCCCGCCATGGCCGCCGCCGCCGCCGTGGCCGGCCATTTCGTCGACGTGCGCACTTTCCAATAG
PROTEIN sequence
Length: 468
MPQTLYDKLWDAHVVHQGPDGTCLLYIDRHLVHEVTSPQAFEGLELAGRKPWRISANLAVADHNVPTTARSEGIQDPVSRLQVDTLDKNCDTWGITEFRMNDRRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGAMGALAFGIGTSEVEHVLATQTLLMKKSRSMLVRVEGELPFGCTAKDLILYVIGRIGTAGGTGYAIEFGGSAVRALSMEGRMTVCNMAIEAGARSGMVAVDQTTIDYFKGRPYAPEGALWDQAVEYWRTLHSDPDAAFDRVVEIDAADIEPQVSWGTSPEMVAAVGARVPDPAAETDAVRRKGMERALQYMDLKAGTPLAEVAIDKVFIGSCTNARIEDLRAAAAVARGRRVAPNVRLAMVVPGSGLVKAQAEREGLDRIFLDAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGQGGRTHLVSPAMAAAAAVAGHFVDVRTFQ*