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SCN18_25_1_16_R1_B_scaffold_1606_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2..448

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 141.0
  • Bit_score: 218
  • Evalue 7.30e-55
dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3BBR5_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 148.0
  • Bit_score: 222
  • Evalue 2.30e-55
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KFJ93094.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 141.0
  • Bit_score: 224
  • Evalue 6.60e-56

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
TACCGCGAAGAGGCCGGCATCGAGCTGGATTTCGTGCAGGACAACGTCTCGCGCTCCGCGCGCGGCGTGCTGCGCGGCCTGCACTTCCAACGCACCCGCCCGCAGGGCAAGCTGATCCAGGTAATCGCAGGCGCCGTCTTCGACGTGGCCGTGGACATCGATCCCCGCTCCGCCACCTTCGGCCAGCACGTCGCGGTGGAGCTGTCGGCCGACAACCACCGCCAGATCTGGATCCCGCCCGGCTACGCGCACGGCTTCTGCGTCACCAGCGAGGCCGCGATCTTCCAGTACAAGTGCACGGACTACTACGATCCGGCCGACGAGGGCGGCCTGGCCTGGAACTGCCCGGACCTGGCGATTCCCTGGCCGATCCGGGATCCCATCCTGTCCGACAAGGACCGGCGCCATCCGGGGCTGAAGGACTGGGCGCGGACGCTGGCGCGCTAG
PROTEIN sequence
Length: 149
YREEAGIELDFVQDNVSRSARGVLRGLHFQRTRPQGKLIQVIAGAVFDVAVDIDPRSATFGQHVAVELSADNHRQIWIPPGYAHGFCVTSEAAIFQYKCTDYYDPADEGGLAWNCPDLAIPWPIRDPILSDKDRRHPGLKDWARTLAR*