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SCN18_25_1_16_R1_B_scaffold_1606_4

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2488..3375

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KX53_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 289.0
  • Bit_score: 426
  • Evalue 2.10e-116
LysR family transcriptional regulator {ECO:0000313|EMBL:KEC79716.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 285.0
  • Bit_score: 439
  • Evalue 3.40e-120
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 291.0
  • Bit_score: 420
  • Evalue 2.50e-115

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACTCGATCCCGCAGGCTGCCGCCATTGAACGCCTTGCGCGCCTTCGAGGCAGCAGGACGCCACCGCGGCTTCCGTGCTGCGGCGGAGGAACTGAACGTCACGCAGGGCGCCGTCGCGCAGCAGGTGCGTGGATTGGAAGACCGTCTCGGCCTTGCGCTGTTCCAGCGCCTGCCGCGCGGGCTGGCCTTGACCGGGCCTGGCGCGGCTTACCTCGCGGATGTCGGTCGCGCCTTCGACATCCTCGCCATCGCCACAGGGCGACTGCTGGCCCAGCCGAATACCGTGACGATCAGCGTCACTCCCACGGTGGCGGCCAAGCTGCTGATTCCCCGCCTGGCGCAATTGCAGGCCGACCTGCCCGAAGTGGAATTGCGCACCGTGGCGACAGAAGCGCTGTCGGACTTCGACCGGGATCAAGTGGACATCGCGGTACGAATGGCCCGATCGCCATTTCCGCCAGATCAGGAAGCACGGCTGCTGTTCCGCCAGGAATTGGTGGCCGTGGCGAGCCCGCATCTGGTGAAGGGCATGACATTGCCTCTGGACATCGGTCGGCTGCGGACGCTGCCGCTCTTGCACGATGCCCACCACCACTGGCCCGCATTCCTGCACTCTGGCACCCCATTGCCTGGCGCGGTGTTCAACCAGACCGCGCTGGCCCTCGATGCGGCCATGGCGGGGCAAGGCATTGCCCTGGCATGCCGGGCTTTCGTGGCCGCTGATCTTGAAGCGGGACGCTTGGTGCGGGTCACGGATGCCACAACCATCATGGAGCCGGATTACTTTCTGGTTCGCAAGCGAACACCCGCGCCGAGCAAAGCGGTGCAGGCGGTATGGGAATGGTGCGCGAGCCGGCTGCGTCTGCCTGCGCAAGACGTGAAATAA
PROTEIN sequence
Length: 296
MTRSRRLPPLNALRAFEAAGRHRGFRAAAEELNVTQGAVAQQVRGLEDRLGLALFQRLPRGLALTGPGAAYLADVGRAFDILAIATGRLLAQPNTVTISVTPTVAAKLLIPRLAQLQADLPEVELRTVATEALSDFDRDQVDIAVRMARSPFPPDQEARLLFRQELVAVASPHLVKGMTLPLDIGRLRTLPLLHDAHHHWPAFLHSGTPLPGAVFNQTALALDAAMAGQGIALACRAFVAADLEAGRLVRVTDATTIMEPDYFLVRKRTPAPSKAVQAVWEWCASRLRLPAQDVK*