ggKbase home page

SCN18_25_1_16_R1_B_scaffold_533_18

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(18126..18830)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00038082A6 similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 234.0
  • Bit_score: 251
  • Evalue 5.70e-64
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KGF68613.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 233.0
  • Bit_score: 250
  • Evalue 2.30e-63
livF; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 233.0
  • Bit_score: 248
  • Evalue 1.80e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCTCAGGGTTGAGAAGCTCAGCGCCTACTACGGCGCGACGCAGATCCTCCACGACATCGACATGTTCGTGGAGTCGGGCGAGATCGTCGGCCTGGTAGGCGCCAACGCGGCCGGCAAGAGCACGCTGATGTATTCGCTCTCGGGGCTGCGCACACGCTGCACCGGCAGCATCTCCATCGACGGCAGGCGGATCGACGCGCTGCAGGCGGACCAGCGCGTCCCGCTCGGCCTGGTGCTGGTTCCCGAACGGCGGCGCCTGTTCCCGTTCATGACCGTGCTCGAGAATCTCGAGATCGGCGCCTATTCCGCCGATGCGCGCGCGCATCGGCGCGAGACGCTCGAGCAGGTCTTCACCCTGCTTCCCCGGCTCGCCGAGCGGCGCGACCAGGAGGCCGGATCGTTGAGCGGGGGCGAGCAGCAGATGGTCGCGCTCGGCCGCGCACTCATGGCGAGGCCGAGGATTCTCCTGCTCGACGAACCCACGGAGGGGCTTGCGCCGATCTTCGTCAACCTCGTCTACGACCTCGTTCGTGCCTTGCGCGCACTCGAGCAGACGGTGCTGATCGTCGAGCAGAACGTGCAGCACGTGCTGCGAACGGCCGATCGCGCCTACGTTCTCGAGAACGGCCGCATCACGATGCACGGCACGGGCGAGGAACTGCTCGGGAACGAAAGGCTGAAGGTCGCGTATCTGGGGCTTTGA
PROTEIN sequence
Length: 235
MLRVEKLSAYYGATQILHDIDMFVESGEIVGLVGANAAGKSTLMYSLSGLRTRCTGSISIDGRRIDALQADQRVPLGLVLVPERRRLFPFMTVLENLEIGAYSADARAHRRETLEQVFTLLPRLAERRDQEAGSLSGGEQQMVALGRALMARPRILLLDEPTEGLAPIFVNLVYDLVRALRALEQTVLIVEQNVQHVLRTADRAYVLENGRITMHGTGEELLGNERLKVAYLGL*