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SCN18_25_1_16_R1_B_scaffold_315_4

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1974..2927)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL98_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 513
  • Evalue 1.10e-142
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 513
  • Evalue 3.10e-143
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV11522.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 317.0
  • Bit_score: 513
  • Evalue 1.50e-142

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGGTCATCAAGCGCATATCGGGCCGACCGATGCCGAGTTGGCCATTGCCGCTCGTGCCGGCGACTGTGGCTGCCTCGGGCTGCTTCTGGAACGCCATCGCGCGCGGCTGTACGCGGCGGCATTGAGGGTGCTCGGCTACGGCCCGGAAGCCGAGGATGCCGTCCATGACACGTTTCTCATCGCGCTGAAGCGCATCGGCGACCTCGAGGACCCACAGGCAGTCGTCGGCTGGCTTCACGCCGTGCTGCACCGCTGCTGCCTGCGGCAATTGCGCCGTGGACGGCGCGAGGTGCTGGTCGCGGAGATTCCCGATCGCCCCGACGAACGGCCCGGCGTCGAGGAGCGGCTGGAAAAGGCTGCACTGCGCGAATGGGTCTGGGACGCACTGCGAAAACTTCCCGAGCCGCTGCAGGCCACCGCCATGCTGCGCTACTTCGGCAGCTATCCCTCGTACGAGGAGCTGGCCGCCATCCTGGCGATTCCGATCGGGACGGTCCGCAGCCGCCTGTCGGAGGCCAAGCGCAAGCTGGCCGAGATGCTGCTCGAGACGGCAGGCCTCGTCGATTCCGACGCCAGGTTGCGATCGCTCGAGCGCCGGCGGTTCTATGAAGAGGTCTTTCGCGGCCTCGGCCGCCCTGGCGAGCGCGAGCGCTGCCTCGACCATTTCGCAGAGGACCTTCATCTCGTCCGCGGAGCGGCCAAGCCGGTATTCGGGCGGTCATTCGTCGCCCGGGAGGTCATCGAGGACGCTGAAGCCGGCGTCATCCTCGAACCGCAGCGCATCCTCGGCGCCGGCCAAGTCGTGGTGATCGAGGGACGCTTCGTCAATCCGCCCGAGGATCCGTTCCATTGCCCGCCCGGCGTCGCATTCGTGGTCTTTCAGCGCAACGGCAAGGTCGGCCGTCTGCATATCCACCTGTCGCCGCGTCCGCCCAGAATCGACGACGACTGA
PROTEIN sequence
Length: 318
MGHQAHIGPTDAELAIAARAGDCGCLGLLLERHRARLYAAALRVLGYGPEAEDAVHDTFLIALKRIGDLEDPQAVVGWLHAVLHRCCLRQLRRGRREVLVAEIPDRPDERPGVEERLEKAALREWVWDALRKLPEPLQATAMLRYFGSYPSYEELAAILAIPIGTVRSRLSEAKRKLAEMLLETAGLVDSDARLRSLERRRFYEEVFRGLGRPGERERCLDHFAEDLHLVRGAAKPVFGRSFVAREVIEDAEAGVILEPQRILGAGQVVVIEGRFVNPPEDPFHCPPGVAFVVFQRNGKVGRLHIHLSPRPPRIDDD*