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SCN18_25_1_16_R1_B_scaffold_315_20

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 21441..21857

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DF76_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 97.0
  • Bit_score: 172
  • Evalue 1.50e-40
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 98.0
  • Bit_score: 174
  • Evalue 7.30e-41
Integration host factor alpha subunit similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 172
  • Evalue 4.30e-41

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGATCCAGTTTGGCCATACGGTCCCGGACCATCTGCATGATCCCTCCGGCGAAGCGCAGATCCCCGCCAGGGCTTCCGAGTCGCCCCTGCCGCCGGCCGACGGCGCGGTGAACGGCAGCGAGCCCCTGACCCTCACCAAGGCGGAGCTCGCCGAGATGCTGTTCGAGCGCGTCGGCCTGAACAAGCGCGAAGCGAAGGACATGGTCGAGACCTTCTTCGACGAGATCCGCGATGCGCTCGAGCGCGGCGAGAGCGTCAAGCTCTCGGGTTTCGGCAACTTCCAGCTGCGCGACAAGCCCCAGCGGCCGGGACGCAACCCGAAGACCGGCGAGGAGATCCCGATCTCCGCCCGGCGCGTGGTCACCTTTCACGCCAGCCAGAAGCTGAAGGCGCAGATCGAGGAGCCGGGCAACTGA
PROTEIN sequence
Length: 139
MIQFGHTVPDHLHDPSGEAQIPARASESPLPPADGAVNGSEPLTLTKAELAEMLFERVGLNKREAKDMVETFFDEIRDALERGESVKLSGFGNFQLRDKPQRPGRNPKTGEEIPISARRVVTFHASQKLKAQIEEPGN*