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SCN18_25_1_16_R1_B_scaffold_321_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(3..722)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 237.0
  • Bit_score: 300
  • Evalue 1.20e-78
tRNA pseudouridine synthase B n=1 Tax=Burkholderia sp. RPE64 RepID=R4WH66_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 238.0
  • Bit_score: 300
  • Evalue 1.40e-78
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 237.0
  • Bit_score: 300
  • Evalue 2.40e-79

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCCGGTCGACGGCGTCCTGCTGCTGGACAAGCCGCGCGGCCTGAGCTCGACCGGCGCGCTGGCGCGCGCGCGCCGGCTGCTCGGGGCGCGCAAGGCCGGCCATGGCGGCACGCTCGATCCCATGGCCACCGGCCTGCTGCCCCTGCTGTTCGGCGAGGCGACCAAGTTCGCCGACGACTCGCTGGCGGCCGACAAGACCTACCTGGCCGAGATCACCCTGGGCGTGGCCACCGATACCGGCGACGCCGAGGGCGAGCCGATTGCCCGGCGCGAGGTCCGCTGCGATGCCGCGGCGTTCGCCGCGGCGGCCGCTGCCTTCGTCGGCCGCATCGAGCAGGTGCCGCCCATGCATTCGGCGCTCAAGCGCGACGGCCGGCCGCTGTACGACTATGCGCGGGCCGGCCTGGCCGTCGAGCGCGCCCCGCGCACCGTGACCGTCCACGCCATCGAGATGCTGGCCTGGGATGCTCCGCGCGCCAGCGTGCGCGTGAGCTGCAGCAAGGGCACCTACATCCGCACCCTGGCCACCGACATCGGCGAGCGCCTGGGCTGCGGCGCGCACCTGAGCGCGCTGCGCCGCGAGCGCGTCGGCGCCCTGTCGGTGGCCGACGCGATCACCCTCGAGGCGCTCGAGGCGCTCGCGCCCCACGAGCGGCAGGCCCGGCTCGCGCCGGCCGACGCGCTGCTCGCCGGCCTGCCCCGCGTGACGCTCGACGAC
PROTEIN sequence
Length: 240
MPVDGVLLLDKPRGLSSTGALARARRLLGARKAGHGGTLDPMATGLLPLLFGEATKFADDSLAADKTYLAEITLGVATDTGDAEGEPIARREVRCDAAAFAAAAAAFVGRIEQVPPMHSALKRDGRPLYDYARAGLAVERAPRTVTVHAIEMLAWDAPRASVRVSCSKGTYIRTLATDIGERLGCGAHLSALRRERVGALSVADAITLEALEALAPHERQARLAPADALLAGLPRVTLDD