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SCN18_25_1_16_R1_B_scaffold_321_5

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5578..6165)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation protein RimP n=2 Tax=Pandoraea RepID=V5UJG7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 125.0
  • Bit_score: 147
  • Evalue 7.30e-33
ribosome maturation protein RimP similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 125.0
  • Bit_score: 147
  • Evalue 2.10e-33
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 125.0
  • Bit_score: 147
  • Evalue 1.00e-32

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACGTCGACGCAGGCGATCATCGCACGCACCCTTGCGGCCATGGGTTACGAGCTGGTCGATCTGGAGCATGCCGCCGACGGCCTGCTGCGGGTCTATATCGATGCCCCGGCGGGCATCACGCTCGACGATTGCGAGCGCGTCAGCCGGCAGCTGTCGCACGTGCTGGCGGTCGAGGACGTCGACTACGCGCGGCTCGAGGTGTCGTCGCCGGGCCTCGACCGGCCGTTGAAGAAGGCGGCCGACTTCGAGCGCTTCGCCGGTTCGCAGGTGGCGCTGCGCATGCGGCGTGCGCTCGAGGGGCGGCGCAACTTCGAGGGTGTGCTCACCGTCGAGGCCGACGGGCAGTTCGGGCTCGAGCTGGTCGAGCGCGCGCCGGCGCCCCTGCGCAAGGGCGGCAGGGCCGGATCGGGGAAGTCCGCTGCGAAGGGCGCGGCGGGCAGGGCGGGGCAGGCGGCAGGGCAGGCGCCGAAGGCGCACGGGCATGCCGAGGCCGTGCCGGCCGCGGGCCGCAAGCTGGTTTTTTCCCTCGACGAGATCGAGCGGGCCCGGCTGGTGCCGGAGCTGAAGTTTCAGGAGGCGAGATGA
PROTEIN sequence
Length: 196
MTSTQAIIARTLAAMGYELVDLEHAADGLLRVYIDAPAGITLDDCERVSRQLSHVLAVEDVDYARLEVSSPGLDRPLKKAADFERFAGSQVALRMRRALEGRRNFEGVLTVEADGQFGLELVERAPAPLRKGGRAGSGKSAAKGAAGRAGQAAGQAPKAHGHAEAVPAAGRKLVFSLDEIERARLVPELKFQEAR*