ggKbase home page

SCN18_25_1_16_R1_B_scaffold_726_10

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(10677..11594)

Top 3 Functional Annotations

Value Algorithm Source
2-nitropropane dioxygenase NPD n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGJ6_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 297.0
  • Bit_score: 446
  • Evalue 2.00e-122
2-nitropropane dioxygenase similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 297.0
  • Bit_score: 446
  • Evalue 5.80e-123
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ACF02673.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 297.0
  • Bit_score: 446
  • Evalue 2.90e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGTTTCTGGTGTCGGGCGTCGACCTTGTATCGGCGGCCTGCGCGGCCGGCGTGATCGGCGCGTTTCCGACGGTGAACTGCCGCACGTCCGATGAGCTTGAAAGCTGGCTCACGGAGATCGAAACGCGATTGGCGAAAGTCGCCGAGCACGGCAGCCGTCCGGTTGCGCCATGGTGCGCCAATCTTATCGTTCATCGTTCGAACGTTCGGCTCAACGACGATCTTGCGATACTGCTTCGGCATAAGCCGGAAGTCGTCATCACCTCGGTCGGCTCGCCGGCTCCGGTCATCGATCCGCTGCATGAAGTCGGCGCTCTCGTGCTCGCCGATGTCGCGACCATTCGCCATGCCGAGCGCGCAGTGGCGGCGGGAGCGGATGGACTGGTGTTGCTGACGGCGGGCGCGGGCGGCCAGACTGGATGGCTCAATCCGCTGGCGTTCGTGCGCGCGGTGCGTTCGTTTTTCGACGGACCGGTGGTGCTGTCGGGCGGCGTTTCCGACGGTGCGGCGCTGCTGGCGGCGCAGGCGATGGGTTGCGACCTCGCCTACATGGGCACCAAGTTCATCGCGACAAAGGAAAGCCTCGCGAAGCCAGCCTATCGCGACATGCTCGTGAAAGCACGCGCTGATGACGTGTTGCTGACGCGCGCGTTCACCGGGCTTGAGACCAACATGCTGAGACCGTCGATCGTTGCCGCCGGGCTCGATCCCGACAATCTGCCGGTGCGCGGGACCATCGACATCGGCAAGGACATCAGCATTGAAAGTCGGGAGAAGCAGCCAACGCGCTGGCGCGACGTCTGGAGCGCGGGGCATAGCGTGTCAGGTGTCGAGGCGGTGGTGAGCGTTGCGGATCTGGTGAGTCAGACACGCGCCGAATACGACGCGGCGCGGGTCGCGCTGAAGGCGCGATTGTAG
PROTEIN sequence
Length: 306
MFLVSGVDLVSAACAAGVIGAFPTVNCRTSDELESWLTEIETRLAKVAEHGSRPVAPWCANLIVHRSNVRLNDDLAILLRHKPEVVITSVGSPAPVIDPLHEVGALVLADVATIRHAERAVAAGADGLVLLTAGAGGQTGWLNPLAFVRAVRSFFDGPVVLSGGVSDGAALLAAQAMGCDLAYMGTKFIATKESLAKPAYRDMLVKARADDVLLTRAFTGLETNMLRPSIVAAGLDPDNLPVRGTIDIGKDISIESREKQPTRWRDVWSAGHSVSGVEAVVSVADLVSQTRAEYDAARVALKARL*