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SCN18_13_7_16_R1_B_scaffold_1536_7

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: 6361..7629

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAI7_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 409.0
  • Bit_score: 316
  • Evalue 3.40e-83
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 409.0
  • Bit_score: 316
  • Evalue 9.60e-84
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACF00524.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 409.0
  • Bit_score: 316
  • Evalue 4.70e-83

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGCGTCGTGCCTTCAATTGGATCAAGCCGGCTCTTGCAGCCGCTTCCGTTCTGGTGCTTGCGGCGTCCGGCGCCGCAGCGGCCGAAAAGGCCTCGCCGGGCGTCACCGACACCGAAATCAAAATCGGTGGCATTTGCCCCAGCACCGGCCCGATCGCGTCCTTCGTTACGATCTGCGCCATGCAGGATGCCTACTTCAAGTACATCAACGATCGCGATGGCGGCGTGATGATGGGTGACGGCAAGCGCCGGAAGATTTCCTACACGTATTATGATGACGGCTACTCGCCGCCGCGCACCGTGGAGCAGGCCCGGCGTCTTGTCGAACGCGATCAGGTCGCGTTGATCATCGGCCCGTTAGGCAGCGCGACCGGCTTGGCGATCCGTGATTATGTCAACAAGCGCGGCGTGCCGCAGCTCTTCGTCGGCAGCGGCCTTTCGGCATTCAGCACCGACTCCAAGGCGTTTCCCTGGACCATTGGCTGGCAGTCGGCCTACACCACCGAGGGCAGTATCTTCGCGGAATTCGTGAAGACGAAAAAGGCCGACGCCAAGGTCGCGGTCCTTTATCAGAACGACGACTTTGGCAAGGAGCTGTTGAACGCGTTCAAGCACGCGGCCGAGGGCAGCGGCATCAGCATCGCTGCCGCACAGTCTTACGAGGTGACGTCGCCGACGGTGGATTCACAGGTCTCCAATCTCGCGGCGACCAATGCCGATGTGCTCCTCGTGTTTGCAGTCCCGAAGTTCACCGCGCAGACGCTGCGCAAGGTGCAGGATACGTCCTGGCGGCCGATGGTGATCGTCACCAACATCAGCGCCTCGAAGAAGACAGTGATGGAGCCTGCCGGCGAGGAGGCTTCGGAAGGCGTCTATTCGGCGGTTGCTCAAATGGACCCGACTACCAAGGACTATGCCGACACCAAAGATATCAAGACCTATCGCGAGGTCGGCACCAAGTTTCCCAGCTCCGGCCTTAACCTCGATGATCCAATGACGATGATCGGCTTCGGGCAGGCGCAAACCATGGTCGCCGTGCTTGAGAAAACCAAGACACCGACGCGCGCGGGGATCATGGAATCGGCGCGGCATCTGTGTGGTGTTCCGGTGCTCGGTCTTGTCCCCGGCGTCAAGGCGTGCGTCGACGGCGAGCGTGATCCGTTCTACATCGAATCGATGCAGGTGGTCCGCTACAGCAAAGGAAGCTGGGCACCGGTAGGTGACGTGATCACGAAGTATGAGGGCAAGACCCCTCATCAAGCCAAGTAA
PROTEIN sequence
Length: 423
MRRAFNWIKPALAAASVLVLAASGAAAAEKASPGVTDTEIKIGGICPSTGPIASFVTICAMQDAYFKYINDRDGGVMMGDGKRRKISYTYYDDGYSPPRTVEQARRLVERDQVALIIGPLGSATGLAIRDYVNKRGVPQLFVGSGLSAFSTDSKAFPWTIGWQSAYTTEGSIFAEFVKTKKADAKVAVLYQNDDFGKELLNAFKHAAEGSGISIAAAQSYEVTSPTVDSQVSNLAATNADVLLVFAVPKFTAQTLRKVQDTSWRPMVIVTNISASKKTVMEPAGEEASEGVYSAVAQMDPTTKDYADTKDIKTYREVGTKFPSSGLNLDDPMTMIGFGQAQTMVAVLEKTKTPTRAGIMESARHLCGVPVLGLVPGVKACVDGERDPFYIESMQVVRYSKGSWAPVGDVITKYEGKTPHQAK*