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SCN18_13_7_16_R1_B_scaffold_967_5

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(6938..7465)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 171.0
  • Bit_score: 193
  • Evalue 1.00e-46
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 171.0
  • Bit_score: 193
  • Evalue 3.00e-47
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02828.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 171.0
  • Bit_score: 193
  • Evalue 1.50e-46

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
ATGACCACGCCGCAGCAAAGCATTGATAATACATTGGAGGTATACTTTACTGATATCTTCAAAAAACATGAATACAGGTTGTATACCCTTGTATCACATCTCACCAAGTCTGATCAATATGCCAAAGATGTAGTGCAGGAGGTCTTCTTAAAGTTGTGGATACAAAGATCAAACCTTCATACTATTGATAATATAGAAGCCTGGCTTTATAAACTTACCGAAAACAGAGTTATTGATTTTCTCAAAAAAACCGCTTCGGAACGCAAACTGCGGGATGCTTTATGGATAAATATACACCATATGGCAGGCGATGCTGAGGAAACAATTTCCTCGAAAGAGTATAACAAAATCATTGACAAAGCCATTGATCAATTGCCGCCGCAACGCAAACGGATTTACCGGCTATCCAAAGAGGATGGTCTTAATTATAATGAAATGGCCAGGCATCTCAACTTTTCAAGAAAGACCATCAACAATTACTTCCTGAAGGCTTCCGTATATCTGAAAAACCTGATTATTAAAGATTAA
PROTEIN sequence
Length: 176
MTTPQQSIDNTLEVYFTDIFKKHEYRLYTLVSHLTKSDQYAKDVVQEVFLKLWIQRSNLHTIDNIEAWLYKLTENRVIDFLKKTASERKLRDALWINIHHMAGDAEETISSKEYNKIIDKAIDQLPPQRKRIYRLSKEDGLNYNEMARHLNFSRKTINNYFLKASVYLKNLIIKD*