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SCN18_13_7_16_R1_B_scaffold_10_10

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(9966..10385)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IYK8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 137.0
  • Bit_score: 179
  • Evalue 2.10e-42
Putative membrane protein {ECO:0000313|EMBL:EJN40331.1}; Flags: Precursor;; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 137.0
  • Bit_score: 179
  • Evalue 3.00e-42
SURF4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 137.0
  • Bit_score: 176
  • Evalue 5.10e-42

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCTGGATGGATGGGTGGAACGCAACCGCGATGGGCTGATCCTGCTGGCGCGGATCCTGTTGATGGTGCTGTTCGTGGTGTCGGGCTGGGCCAAGCTGACCGATTTCCAAGGCACGGTCGGCTACATGGCCTCGCTGCACGCACCGCTGCCGCAGGTGGCAGCCGGTGTGGCGGTCTGCATGGAATTCCTGGTCGGCATCGCCCTGCTGCTGGGGATCCAGGTGCGGCTGCTGGCGCTGCTGTTCGTCCTGTTCGTGCTGGGCACCGGCGTACTCGGCCATGCGTTCTGGAGCATGGAAGGCGCCGAGCGCGCGATGAACATGACCCAGTTCCTGAAGAACCTGTCCATTGCCGGCGGGCTGGTGCTGCTGGCGGTGACCGGCGGCGGGCGTTATGCGGTGGTCGGGCGGCCGCGCTGA
PROTEIN sequence
Length: 140
MLDGWVERNRDGLILLARILLMVLFVVSGWAKLTDFQGTVGYMASLHAPLPQVAAGVAVCMEFLVGIALLLGIQVRLLALLFVLFVLGTGVLGHAFWSMEGAERAMNMTQFLKNLSIAGGLVLLAVTGGGRYAVVGRPR*