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SCN18_13_7_16_R1_B_scaffold_10_29

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(35212..36081)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003607C44 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 290.0
  • Bit_score: 380
  • Evalue 7.60e-103
LytTR family transcriptional regulator {ECO:0000313|EMBL:AKC87808.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 282.0
  • Bit_score: 406
  • Evalue 2.40e-110
LytTR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 286.0
  • Bit_score: 380
  • Evalue 3.70e-103

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGCCCTCCGACCTTCTACCAGCGCTATCAACCGTGGCGACGTTTCACCGAGATCGGGTTCTGGGTGGTCCAGTACCTCGCCAGTGGGCTGGCCAACAGCATCACCGTGAACATGGATGTACGCCGGCAGCATCTGGATTTCAGCGCCTGGCAACCGATGGTATGGGAAACCAGCTCCGCCCTGGCGGCGCTGGCGCTGGTGCCTGCTGTGGTCTGGTTCACTCGCCGCTTCCCTTTGCACGTGGATGACTGGCGACGGCTGTTGCCGCTGCACCTGCTGGGGAGCCTTGCGTGGTCGATGCTGCACGTGGCCGGGATGGTGGCGATCCGCAAGTTGGCCTACGCCAGTGCCGGAGACAGCTACGATTTCGGGTCATGGTGGCGCGAGTTCGGCTACGAATACCTGAAGGACGTTCGCTCCTACGCCGGCATGGTGCTGACCATCGAGGGCTATCGCCTGTTGCTGCGCCGCCTGCAGGGCGAAGCCATGCTGCTGTCGCTGCCAGACGAGGGGCCGCCCGTGGAGCCGGTGGATCGTCCCGAGCGTTTCCTGGTGCGCAAGCTCGGCCGCGAATTCCTGGTCGCCGCCGCCGACATCGAATGGCTGCAGGCCGCCGGCAACTACGTCAACCTGCGGGTGCGCCACCACGATTACCCGCTGCGCAGCACCATCGCCGGGATCGAGGCCAAGCTCGACCCGGACTGCTTCGTGCGCATCCACCGCAGTTACATCGTCAACCTGTCACAGGTAGCCTCGATCGAGCCGCTGGACAGCGGCGACGCCCGGGTCCACCTGCGCGACGCCACGGTGCTGCCCTGCAGCCGCCGCTACCGGGCAGGACTGCGCGCCCGCGGCGGCGTTGAATAG
PROTEIN sequence
Length: 290
MSPPTFYQRYQPWRRFTEIGFWVVQYLASGLANSITVNMDVRRQHLDFSAWQPMVWETSSALAALALVPAVVWFTRRFPLHVDDWRRLLPLHLLGSLAWSMLHVAGMVAIRKLAYASAGDSYDFGSWWREFGYEYLKDVRSYAGMVLTIEGYRLLLRRLQGEAMLLSLPDEGPPVEPVDRPERFLVRKLGREFLVAAADIEWLQAAGNYVNLRVRHHDYPLRSTIAGIEAKLDPDCFVRIHRSYIVNLSQVASIEPLDSGDARVHLRDATVLPCSRRYRAGLRARGGVE*