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SCN18_10_11_15_R4_P_scaffold_788_2

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(2992..7068)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 1358.0
  • Bit_score: 2609
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RPOB_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 1358.0
  • Bit_score: 2609
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 1358.0
  • Bit_score: 2609
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4077
ATGGCGCAAACGTTCACCGGTCGTAAGCGGATCCGCAAGTTCTTCGGCAAGATCAAGGAAGTGGCCGAGATGCCGAACCTCATCGAGGTTCAGAAGGCGTCCTACGACCAGTTCCTCCAGATCGAGGAGCCCAAGGGCGGACGCGACGACGACGGCCTGCAGGCGGTGTTCAAGTCGGTATTCCCCATCTCCGACTTCTCCGGCGCGGCCATGCTGGAGTTCGTCCGCTACGAGTTCGAGCCCCCGAAGTATGACGTGGACGAGTGCCGCCAGCGCGGCATGACGTTCGCTGCCCCGCTCAAGGTGACGCTCCGCCTCATCGTGTTCGATGTGGATCCGGATACCGGCGCCAAGTCCGTCAAGGACATCAAGGAGCAGGACGTCTACACCGGCGACATCCCGCTGATGACCATGAACGGCACGTTCATTGTCAACGGCACCGAGCGCGTCATCGTCTCCCAGATGCACCGTTCGCCGGGCGTCTTCTTCGACCACGACAAGGGCAAGACCCACTCTTCGGGCAAGCTCCTGTTCGCGGCGCGCATCATTCCCTATCGCGGGTCCTGGCTCGACATCGAGTTCGACGCCAAGGACATCGTCTATGCGCGCATCGACCGGCGCCGCAAGATTCCCGTCACCAGCCTGCTCTACGCGCTCGGCCTCGACAGCGAGGAAATCCTCTCGACCTTCTACGAGAAGATCCCCTACGAGCGGGCCAAGGGCGGCTGGCGCATGCCGTTCGATCCCAAGCGGATGAAGGGCTACAAGGCGGTCTCCGATCTGGTGGACGCCGACACCGGCGAGGTTGTGCTCGAGGCGGGCAAGAAGCTCACCGTGCGCGCCGCCCGGCAGCTGGCCGAGAAGGGCCTGAAGTTCCTCAAGATCTCCGACGAGGAGATGGTCGGCCAGTACATCGCCGAGGACCTCGTGGACATCGCGTCCGGCGAGATCCACGCCGAGGCCGGCGACGAGATCACCGAGAAGACGCTGAAGCTGCTCGAGGAAGCCGGCTACAACGAGATCCCGATCCTCGACATCGACCACGTCAACACCGGCGCCTACATCCGCAACACGCTGGCGGCCGACAAGAACGTGACCCGCGAGGACGCGCTCTTCGACATCTACCGCGTGATGCGCCCGGGCGAGCCGCCGACGCTCGATTCGGCGCAGGCCATGTTCCACTCGCTGTTCTTCGATCCCGAGCGCTACGACCTCTCCGCGGTCGGCCGCGTGAAGATGAACATGCGCCTCGACCTCGACTGCCCGGACACCGTGCGGGTGCTGCGCCGCGACGACATCCTCTCCGTCATCAAGACGCTGGTGGAGCTGCGCGACGGCAAGGGCGAGATCGACGACATCGACCACCTGGGCAACCGCCGCGTCCGCTCGGTCGGCGAGCTCATGGAGAACCAGTACCGCGTCGGCCTGCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCGTCCGTCGACATCGACACCGTGATGCCGCAGGACCTGATCAACGCGAAGCCGGTGGCGGCTGCGGTGCGCGAGTTCTTCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTCTCCGAGATCACGCACAAGCGGCGTCTCTCGGCGCTCGGCCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTCATCAACTCGCTGGCGACCTTCGCTCGCGTGAACAAGTACGGCTTCATCGAAGCGCCCTACCGCCGTGTGGTGGATAGCAAGGTCACCGACGAGGTGGTCTATCTCTCCGCCATGGAGGAGGGGAAGTACTACGTCGCGCAGGCCAACATCCCGCTCGACAAGGACGGCCGCTTCGAGGAAGACCTCATCGTCTGCCGCCATGCGGGCGACGTGCTCCTCGTGAGCCCCGACCGCGTGGACTTCATGGACGTGTCGCCGAAGCAGCTCGTTTCGGTGGCCGCGGCGCTGATCCCGTTCCTTGAGAACGACGACGCCAACCGCGCGCTCATGGGTTCGAACATGCAGCGCCAGGCGGTTCCGCTGGTGCGCTCGCAGGCGCCGCTCGTCGGCACCGGCATGGAGGCCGTGGTGGCCCGCGACTCCGGCGCCGCCATCGCCGCCCGCCGCACCGGCGTGATCGATCAGGTGGACGCCACCCGTATCGTCATCCGGGCCACGGAAGAGGCCGACCCGTCCAAGTCGGGCGTCGACATCTACCGGCTGATGAAGTTCCAGCGCTCCAACCAGTCCACCTGCATCAACCAGCGTCCGCTGGTGCGCGTGGGCGACCAGGTGAAGCGGGGCGACATCATCGCCGATGGCCCGTCCACGGAGCTGGGCGAGCTCGCGCTCGGCCGCAACGTGCTCGTCGCCTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTCCTCTCGGAGAACATCGTCAAGGAAGACGTGTTCACCTCGATCCACATCGAGGAATTCGAGTGCATGGCCCGCGACACCAAGCTCGGGCCTGAGGAAATCACCCGCGACATTCCCAACGTCTCGGAAGAGGCGCTGAAGAATCTCGACGAGGCCGGCATCGTCTATATCGGCGCCGAGGTTCGTGCGGGCGACATCCTTGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTCCTCCGCGCCATCTTCGGCGAGAAGGCCGCGGACGTGCGCGACACCTCGCTGCGCCTGCCGCCCGGCACCACCGGCACCATCGTCGAGGTGCGCGTGTTCAACCGCCACGGCGTCGACAAGGACGAGCGCGCGCTCGCCATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGATCGTGACGACGAGCAGGCGATCCTTGATCGTAACGTCTACGGCCGCCTCACCGAGATCCTCGACGGCAAGGTCGCCATCGCGGGGCCGAAGGGCTTCAAGAAGGAAACCGCCGTCACCCGCGAGATCCTCGGTGAGTATCCGCGCTCGCAGTGGTGGCTGTTCGCCGTCGCCGACGACGCCATCATGGCCGAGCTGGAGGCGATCCGCGCCCAGTACGACGACTCGAAGAAGCGGCTCGAGCAGCGCTTCCTCGACAAGGTCGAGAAGCTGCAGCGCGGCGACGAGCTGCCCCCCGGCGTTATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTCTCGCGCATCGTGCCCGTGGAGGACATGCCGTTCCTTGAGGACGGCACCAACGTCGACATCGTGCTGAACCCGCTGGGCGTGCCCTCGCGCATGAACGTCGGGCAGATCCTTGAGACGCATCTCGGCTGGGCCTGCGCGGGCCTTGGCCGGCAGGTGGCCGCCGCGGCGGAAGCCTATTATGCGCGTCAGGACCTGAAGCCGGTGCGCGATCGGCTGGAGACCATCTACGGCAAGGAAGAGATCGATCAGCTCAAGGATTCCGAGCTGCCCGAACTCGCCGAGAACCTGCGCAAGGGCGTGCCCATGGCGACGCCGGTCTTCGACGGCGCGCACGAGGCGGACATCGAGCAGGAGCTGGAGCGGGCGGGTCTCGACCGTTCGGGCCAGTCCACTTTGTTCGACGGACGCACCGGCGAGCCGTTCGATCGTAAGGTGACGGTCGGCTACATCTACATGCTGAAGCTGCATCACCTGGTCGACGACAAGATCCACGCCCGGTCCATCGGTCCTTACTCGCTCGTCACCCAGCAGCCCCTGGGCGGAAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAGGTGTGGGCCCTCGAAGCCTACGGCGCCGCCTACACGCTGCAGGAGATGCTGACCGTGAAGTCGGACGACGTGGCCGGCCGCACCAAGGTCTACGAGGCCATCGTGCGCGGCGAGGACACGTTCGAGAGCGGCATTCCCGAGAGCTTCAACGTGCTCGTGAAGGAAATGCGCTCGCTCGGCCTCAACGTCGATCTCGAGAATACCTGA
PROTEIN sequence
Length: 1359
MAQTFTGRKRIRKFFGKIKEVAEMPNLIEVQKASYDQFLQIEEPKGGRDDDGLQAVFKSVFPISDFSGAAMLEFVRYEFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDVDPDTGAKSVKDIKEQDVYTGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLYALGLDSEEILSTFYEKIPYERAKGGWRMPFDPKRMKGYKAVSDLVDADTGEVVLEAGKKLTVRAARQLAEKGLKFLKISDEEMVGQYIAEDLVDIASGEIHAEAGDEITEKTLKLLEEAGYNEIPILDIDHVNTGAYIRNTLAADKNVTREDALFDIYRVMRPGEPPTLDSAQAMFHSLFFDPERYDLSAVGRVKMNMRLDLDCPDTVRVLRRDDILSVIKTLVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVDIDTVMPQDLINAKPVAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIEAPYRRVVDSKVTDEVVYLSAMEEGKYYVAQANIPLDKDGRFEEDLIVCRHAGDVLLVSPDRVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRSQAPLVGTGMEAVVARDSGAAIAARRTGVIDQVDATRIVIRATEEADPSKSGVDIYRLMKFQRSNQSTCINQRPLVRVGDQVKRGDIIADGPSTELGELALGRNVLVAFMPWNGYNFEDSILLSENIVKEDVFTSIHIEEFECMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGESPMTPEEKLLRAIFGEKAADVRDTSLRLPPGTTGTIVEVRVFNRHGVDKDERALAIEREEIERLAKDRDDEQAILDRNVYGRLTEILDGKVAIAGPKGFKKETAVTREILGEYPRSQWWLFAVADDAIMAELEAIRAQYDDSKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTNVDIVLNPLGVPSRMNVGQILETHLGWACAGLGRQVAAAAEAYYARQDLKPVRDRLETIYGKEEIDQLKDSELPELAENLRKGVPMATPVFDGAHEADIEQELERAGLDRSGQSTLFDGRTGEPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGEDTFESGIPESFNVLVKEMRSLGLNVDLENT*