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SCN18_10_11_15_R4_P_scaffold_123_23

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 23946..24437

Top 3 Functional Annotations

Value Algorithm Source
Putative redox-sensitive transcriptional activator SoxR n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIC6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 145.0
  • Bit_score: 195
  • Evalue 2.60e-47
Uncharacterized protein {ECO:0000313|EMBL:AHE56500.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 232
  • Evalue 2.70e-58
soxR; putative redox-sensitive transcriptional activator SoxR similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 145.0
  • Bit_score: 195
  • Evalue 7.30e-48

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGAGAAGGTCATGGCGTTGCCGCCCCTGCTGTCGATCGGCGAGCTGTCCCGCCGCACCGGGCTGTCGGTCTCCGCCATCCGCTTCTACGAGGCTCAGGGGCTGGTGCGGGCGGTCCGCTCCGGCGGTAACCAGCGACGCTTCGCGCGCGCCGACATCCGGCGGCTGTCCTTTGCGCAGATTGCCCAGACGCTCGGCCTGTCGATCGCCGAGATCGCGGCCGAGCTCGCCAGCTTGCCGCTGGGCCGCGCGCCGACCCGTCAGGATTGGCAGGCGATCAGCCGGCGCATCCGCGGCAGGCTGCAGCAGCGCATCGCGATGCTCGAGCGCACGCGCGACAAGCTCGACGGCTGCATTGGCTGCGGCTGCCTGTCGCTCGACCGTTGCGCCCTCTACAATCCCGGCGACCGCGCCGGCCGGGCGGGCGCCGGTCCGCGCTTCCTCTTGGGGGATCGGCCGCCGATGAAGGGGCGGGCAACAACGCCCCACTAG
PROTEIN sequence
Length: 164
MEKVMALPPLLSIGELSRRTGLSVSAIRFYEAQGLVRAVRSGGNQRRFARADIRRLSFAQIAQTLGLSIAEIAAELASLPLGRAPTRQDWQAISRRIRGRLQQRIAMLERTRDKLDGCIGCGCLSLDRCALYNPGDRAGRAGAGPRFLLGDRPPMKGRATTPH*