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SCN18_10_11_15_R4_P_scaffold_155_25

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(28813..30162)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUT4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 447.0
  • Bit_score: 619
  • Evalue 2.00e-174
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 447.0
  • Bit_score: 619
  • Evalue 5.60e-175
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACU61082.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 447.0
  • Bit_score: 619
  • Evalue 2.80e-174

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Taxonomy

SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1350
TTGGGCAACATCCTTCTCATAGACGACGAAGAAAAACTCCGCACCTTGCTCAGCCGCATCATCCGGCTCGAAGGGTTCATGGTATGGGAAGCGCCCGACCTCAAATCGGCACGTAAGCTGATGGATAAAGAGACCATAGATGTGGTGCTCTGCGATGTAAAATTACCTGATGGCAATGGCCTGCAGTTTGTACAGGAGCTCAAGTCCAAATATCTTTCCGTTGAAATCATATTGCTCACCGCTTATGGCAATATTGCCGATGGCGTTCAGGCCATGAAGAGTGGCGCTTTTGATTATATCACCAAGGGTGATGACAACGAAAAAGTAATTCCGCTCATCAACCAGGCAATGGAAAAAGTACAACTGCGCAAGCATATTGAGTTATTGGAACAACGCGTGGGCAAGCGATATGGTTTCGAGCAGATCCTTGGCCGCTCGCCCCTGATCAAGGAAGCTGTAGCCCTGGCGCAAAAAGTAGCGCCTACCGATGCCACAGTTCTGTTACTGGGAGAAACGGGCACCGGCAAAGAAGTTTTTGCCCAGGCCATACACCATGCCAGTAAAAGAACCTGCAAGCCTTTTCTGGCACTCAATTGCAGCGCATTTGGGAAAGAATTGCTGGAGAGTGAATTATTCGGACACAAAGCCGGTGCTTTCACCAGTGCAGTGAAAGACAAAAAAGGACTCATAGAAGAAGCGAATAATGGCACCCTGTTTCTCGACGAGATCGGCGAAATGCCTATGGAACTGCAGGCCAAATTATTGCGCGTGCTGGAAACAGGAGAATTCATCAAAGTAGGTGATACCCGCTCTACCAAAGTGAATGTGCGCATCATTGCCGCTACCAACCGAAGTTTACAGGATGAAATACAATCAGGACATTTCCGTGAAGACCTTTATTACCGGCTGAATGTTTTCACCATTACACTACCGGCACTGCGCGAAAGAATCAAAGACATCCCATTACTCGCCGAACATTTCCTACGCCAGTTTGCTCTCAAAACCAATCAGCATGTTACAACTATGAACACTGAATTCATGGAGCGCCTGCAGCAACACGATTGGAAGGGCAATATCCGCGAACTCAAGAACGTCATGGAAAGAGCGGTGATCCTGGCCACAGGAGATACCCTTACAACAGAAGACCTGCCGTTTGAATTGCAATCCAGTTTAGGCTCTATCCATAAGAGTTCATCCCAACTTTCCGCTTTTGATCTCTCCAGTGTTGAAAAACTACACATACAACGCGTCTTAAACCATACCAAAGGAAATAAAACCGAAGCCGCCAGGCTATTGAACATCGGGCTCACTACTTTATACAGGAAAATTGAGGAGTATCATATCCTGTGA
PROTEIN sequence
Length: 450
LGNILLIDDEEKLRTLLSRIIRLEGFMVWEAPDLKSARKLMDKETIDVVLCDVKLPDGNGLQFVQELKSKYLSVEIILLTAYGNIADGVQAMKSGAFDYITKGDDNEKVIPLINQAMEKVQLRKHIELLEQRVGKRYGFEQILGRSPLIKEAVALAQKVAPTDATVLLLGETGTGKEVFAQAIHHASKRTCKPFLALNCSAFGKELLESELFGHKAGAFTSAVKDKKGLIEEANNGTLFLDEIGEMPMELQAKLLRVLETGEFIKVGDTRSTKVNVRIIAATNRSLQDEIQSGHFREDLYYRLNVFTITLPALRERIKDIPLLAEHFLRQFALKTNQHVTTMNTEFMERLQQHDWKGNIRELKNVMERAVILATGDTLTTEDLPFELQSSLGSIHKSSSQLSAFDLSSVEKLHIQRVLNHTKGNKTEAARLLNIGLTTLYRKIEEYHIL*