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SCN18_14_9_16_R2_B_scaffold_342_6

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(4449..5315)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XHC2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 287.0
  • Bit_score: 377
  • Evalue 6.40e-102
LysR family transcriptional regulator {ECO:0000313|EMBL:ERI13958.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 287.0
  • Bit_score: 377
  • Evalue 9.00e-102
bacterial regulatory helix-turn-helix , lysR family protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 288.0
  • Bit_score: 375
  • Evalue 6.90e-102

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAAGATCAGCCTTGTCCAGTTGCGCCTGCTCGCGGCCATCGCTGAAACCGGCGGCGTCGGGGCTGCGGCACGGCGGATGCGGCTCACGCAGTCCGGCGCGAGCCAGTCCATTGCTACGCTGGAAAAGATTCTCGGCGCCGAACTCATCACCCGCACGTCCGGCGGCGCGGCGCTGACCGCATTCGGCCGTTCCGTTCTCGCCGATGCGCGTGCAGCACTTTCGGCGGTGGATCGCATCGAGACGCAGGCGCGCAGCAGGGAGGCGGATATGCCACGGCGGTTGCGCGTGGCGGCGATACCGAGCCAGATGGAACATATGCTGCCCGGATGGCGCAAGGCGTTCCTGCGCCTTTACCCGGATGTCGACTTCAGCGCCTTCGAGGGCGGGCATGACGATGTGGGCCAGTGGGTGCGCGACGGCATTGCCGATCTCGGCATCACGTCGCTGCCGCTGCCGGAACTGGAGGCGGCGGAAGCGGGCCGGGAGGAGCTGGTCGTCGTGGGGCGGCGCGACGATCCGTTGATACAGCGCTGGAAGATAGCGCCGGAAGACCTCGCCGCCCGGCGCATGATCTCATCTTGTGGCTGCGAGGCGGTGATCGAGCAGATTTTGAGCGCCAATGGCGAGAACACCGACGAGGGCGTCAGGACGCACGATGTTCCGACCGCGCTGGAAATGGTCCGCAACGGTGTCGGCATGACCATGCTGTCGGAGATCAGCCTGCCGGGCGCGGACATGCGCGATCTGCGGGCGCTGCGGCTCGATCCGCCCACATTCCGCACGGTCTATGTCGTATCGCGGCCCGACAGTCCCGTCAGGCCCTTGATCGGCTGTTTCCGCGAACTGGTGTGCGGCGCTGCCTAA
PROTEIN sequence
Length: 289
MKISLVQLRLLAAIAETGGVGAAARRMRLTQSGASQSIATLEKILGAELITRTSGGAALTAFGRSVLADARAALSAVDRIETQARSREADMPRRLRVAAIPSQMEHMLPGWRKAFLRLYPDVDFSAFEGGHDDVGQWVRDGIADLGITSLPLPELEAAEAGREELVVVGRRDDPLIQRWKIAPEDLAARRMISSCGCEAVIEQILSANGENTDEGVRTHDVPTALEMVRNGVGMTMLSEISLPGADMRDLRALRLDPPTFRTVYVVSRPDSPVRPLIGCFRELVCGAA*