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SCN18_14_9_16_R2_B_scaffold_678_1

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(1..804)

Top 3 Functional Annotations

Value Algorithm Source
Transporter, major facilitator family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW71_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 268.0
  • Bit_score: 446
  • Evalue 1.40e-122
Arabinose polymer transporter {ECO:0000313|EMBL:KFC66688.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 268.0
  • Bit_score: 472
  • Evalue 3.30e-130
Major facilitator family transporter similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 264.0
  • Bit_score: 407
  • Evalue 2.00e-111

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCCCGTCGCGCTCTACGCCCTGACGGCCGGAGCCTTCGGCATCGGCGTCACCGAATTCGTCATCATGGGCCTCCTGCTGGAGGTCAGCCGTGAACTCCATGTCACCATCGCCGCCGCCGGACTGCTGATCTCGGGCTATGCGCTCGGCGTCACCATCGGTGCACCGGTTCTCACCACCCTCACCGCCCACTGGCCGCGCAAGCATGTGCTGATCGGGCTGATGGTCATTTTCGTTATCGGCAACGCCGCCTGCGCGCTCGCGCCGACCTATGGCTGGCTGATGGCGGCACGGATGCTGACAGCGCTGACGCATGGCACCTTCTTCGGCGTCGGGGCCGTAGTGGCGACGGGTCTGGTGTCCGACGACAAGCGCGCCTCGGCGATCTCCATCATGTTCACCGGCCTGACGGTCGCGACCGTGCTCGGCGTCCCCTTCGGCACATGGCTCGGCCAGCACTATGGCTGGCGTGCAACCTTCTGGGCGGTCACGCTGGTGGGGCTGATCGCGCTTGTCGTCCTCGCCGCGCTGGTGCCACAGGACCGGACACAGCCAGAAACTTCCGACTGGCGGGCCGGCCTGCGCGCGATCATCCGCCGTCCCGTCCTGCTCGGCCTGCTGACCACCGTGCTCGGCTATGCCGGCGTCTTCGCGGTCTTCACCTATATCGCGCCGCTGTTGACCGAAGTCTCCGGATTCGAGGACAGCGCCGTCTCGCCGATCCTGCTGGTCTTCGGCGGTGGGCTGGTGGCTGGCAATCTCGTGGGCGGCAGGCTGGCCGACCGCAACCTGATCCGCGCCATC
PROTEIN sequence
Length: 268
MPVALYALTAGAFGIGVTEFVIMGLLLEVSRELHVTIAAAGLLISGYALGVTIGAPVLTTLTAHWPRKHVLIGLMVIFVIGNAACALAPTYGWLMAARMLTALTHGTFFGVGAVVATGLVSDDKRASAISIMFTGLTVATVLGVPFGTWLGQHYGWRATFWAVTLVGLIALVVLAALVPQDRTQPETSDWRAGLRAIIRRPVLLGLLTTVLGYAGVFAVFTYIAPLLTEVSGFEDSAVSPILLVFGGGLVAGNLVGGRLADRNLIRAI