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SCN18_14_9_16_R2_B_scaffold_678_2

Organism: SCN18_14_9_16_R2_B_SCNPILOT_CONT_500_BF_Rhizobiales_63_22_63_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 906..1811

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRJ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 301.0
  • Bit_score: 501
  • Evalue 3.10e-139
LysR family transcriptional regulator {ECO:0000313|EMBL:KJF67474.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 300.0
  • Bit_score: 508
  • Evalue 6.10e-141
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 301.0
  • Bit_score: 483
  • Evalue 2.50e-134

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGCGAGGCCCGAGGTAAACCGCTCCGGCGAAATGGAAGTGTTCGTTCGCGTGGTCGAACTCGGTGGCTTCTCGCCTGCCGCACGCTCTGCGCGCATGACGCCTTCGGCCGTCAGCAAGCTGATCGCGCGGCTGGAAGCCCGGCTCGGCGCGCGGCTGCTCAATCGCTCGACGCGTCAGCTTCAGCTCACGCCGGAGGGCTGCGCCTTCTACGAACGGGCGACGCGTATCCTCTCCGACCTTGAGGATGCCGAGCGCGCGGCTGGCATCGGTGAGCAGCCCGTGGGGCGTGTGCGCGTCAACACCAGCGCGTCCTACGCCAACCATATCCTCGCACCGGCGCTGCCCGAATTTCTGGCGATCCATCCGGGTGTTACGCTAGACATCGTGCAAACCGACGCGGTGGTCGATCTTCTGGCGGAGCGCACCGATGTGGCGATCCGGGCAGGGCCGCTGAAAAGCTCCAGCCTCGTCGCGCGCAAGCTTGGCGAGACGGCGCTGACAATCGTGGCTTCGCCGTCCTATCTGGAGCGTTGCGGGGAGCCGCGAAGCATCGCCGACCTTGAGGCGCATAATCGCCTCGGTTTCGGCTATGCGCGTACGGTCGACGGCTGGCCGCTTCGGGAAGGCGGCGAAACCATCGTCGTGCCAGTGACGGGCCGCGTGCAGGCAAGCGACGGCGAGGGCCTGCGCCAGCTGGCTCTCGCCGGCGTCGGCCTTGCCCGTCTCGCCGCGTTCACCATCAGGGCTGACATCGCGGCCGGTCGGCTGATGCCGGTCCTCGTCGATCTCGACACCGGCGAGAGGGAAGCCTTCCATGCCGTCTATATCGGGCAGGGCGGTCCGCTGCCGTCCCGCGTTCGGGCGCTGCTGGATTTCCTCGCGGAACGTGGAAAGGTCTCCTGA
PROTEIN sequence
Length: 302
MARPEVNRSGEMEVFVRVVELGGFSPAARSARMTPSAVSKLIARLEARLGARLLNRSTRQLQLTPEGCAFYERATRILSDLEDAERAAGIGEQPVGRVRVNTSASYANHILAPALPEFLAIHPGVTLDIVQTDAVVDLLAERTDVAIRAGPLKSSSLVARKLGETALTIVASPSYLERCGEPRSIADLEAHNRLGFGYARTVDGWPLREGGETIVVPVTGRVQASDGEGLRQLALAGVGLARLAAFTIRADIAAGRLMPVLVDLDTGEREAFHAVYIGQGGPLPSRVRALLDFLAERGKVS*