ggKbase home page

SCN18_26_2_15_R1_B_scaffold_723_20

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18039..18938

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFD026 related cluster n=1 Tax=unknown RepID=UPI0003CFD026 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 285.0
  • Bit_score: 481
  • Evalue 4.30e-133
ABC transporter permease {ECO:0000313|EMBL:ESZ28579.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 285.0
  • Bit_score: 481
  • Evalue 6.00e-133
potB; spermidine/putrescine ABC transporter permease PotB similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 285.0
  • Bit_score: 349
  • Evalue 9.40e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAGCGCGGCGCCGGGAAACGCCCGCTGGAACGTGATCGGCCTCCTGCCGGCGCAGCTCATCATGCTCGCCACGCTGATCATCCCGGTCGGCATCATCGTCCTGGTGTCGTTCTCGACGCGCGGTCCGTATGGCGGCTTCGAATATGTCTTCACCACCGCCCCCTACAAGCAGATCCTGTTCAACGAGGGATGGTCGGGGGAACTGGAGTTCAACCCGCAATATCTGATCGTGGTCGCCCGCACGATGATCCTGGCCGCGGCGACGACCTTCATCTGCCTCCTGCTGGCCTTCCCCGCCGCCTACTACATCTCGCTGCGCAAGCCGGCGATGAAGATGCTGCTGATCTATCTGGTGACGCTGCCGTTCTGGGTGTCGATGATCGTGCGCGTCTATTCCTGGATCATCATCCTCGGCAATGACGGGGTCATCGCCAAGACGCTGCGCGCGCTCGGCCTCGTGGACAACATGGGCAGCCTGCTGTTCACCGACACCGCCATGCTGATCGGCCTGGTCTACAGCTACATACCGCTGATGATCCTGCCGATCTTCGCCTCCATCGAGAAGCTCGACCCGGCGCTGGTCGAAGCCTCGCACGATCTCTACGGCAGCCGGCTCACCACCTTGCGCAGGGTCATCCTGCCGCTGTGCCGGCCCGGCATGGTGGCGGGCTCCATCCTCGTCTTCGTGCCGTGCCTCGGCGCCGTGCTGGAGCCGATCCTGCTCGGCGGCGGCAAGACGATGATGATGGGCAACCTCATCCAGCTCCAGTTCGGCGCCGCACGCAACTGGCCGCTGGGGGCAGCCATATCCATCGTGCTGATGGCGGCCGTGCTCGTCTTCCTTCTCTGGCGGGGCCTGCGCTCCATACGCCGGGAAGAGGCGGAGGCGGCGGCATGA
PROTEIN sequence
Length: 300
MSAAPGNARWNVIGLLPAQLIMLATLIIPVGIIVLVSFSTRGPYGGFEYVFTTAPYKQILFNEGWSGELEFNPQYLIVVARTMILAAATTFICLLLAFPAAYYISLRKPAMKMLLIYLVTLPFWVSMIVRVYSWIIILGNDGVIAKTLRALGLVDNMGSLLFTDTAMLIGLVYSYIPLMILPIFASIEKLDPALVEASHDLYGSRLTTLRRVILPLCRPGMVAGSILVFVPCLGAVLEPILLGGGKTMMMGNLIQLQFGAARNWPLGAAISIVLMAAVLVFLLWRGLRSIRREEAEAAA*